The Experts below are selected from a list of 324 Experts worldwide ranked by ideXlab platform
Timothy Galitski - One of the best experts on this subject based on the ideXlab platform.
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sbeams microarray Database Software supporting genomic expression analyses for systems biology
BMC Bioinformatics, 2006Co-Authors: Bruz Marzolf, Eric W Deutsch, Patrick Moss, David S Campbell, Michael H Johnson, Timothy GalitskiAbstract:Background The biological information in genomic expression data can be understood, and computationally extracted, in the context of systems of interacting molecules. The automation of this information extraction requires high throughput management and analysis of genomic expression data, and integration of these data with other data types.
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SBEAMS-Microarray: Database Software supporting genomic expression analyses for systems biology
BMC Bioinformatics, 2006Co-Authors: Bruz Marzolf, Eric W Deutsch, Patrick Moss, Michael H Johnson, David Campbell, Timothy GalitskiAbstract:Background The biological information in genomic expression data can be understood, and computationally extracted, in the context of systems of interacting molecules. The automation of this information extraction requires high throughput management and analysis of genomic expression data, and integration of these data with other data types. Results SBEAMS-Microarray , a module of the open-source Systems Biology Experiment Analysis Management System ( SBEAMS ), enables MIAME-compliant storage, management, analysis, and integration of high-throughput genomic expression data. It is interoperable with the Cytoscape network integration, visualization, analysis, and modeling Software platform. Conclusion SBEAMS-Microarray provides end-to-end support for genomic expression analyses for network-based systems biology research.
Bruz Marzolf - One of the best experts on this subject based on the ideXlab platform.
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sbeams microarray Database Software supporting genomic expression analyses for systems biology
BMC Bioinformatics, 2006Co-Authors: Bruz Marzolf, Eric W Deutsch, Patrick Moss, David S Campbell, Michael H Johnson, Timothy GalitskiAbstract:Background The biological information in genomic expression data can be understood, and computationally extracted, in the context of systems of interacting molecules. The automation of this information extraction requires high throughput management and analysis of genomic expression data, and integration of these data with other data types.
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SBEAMS-Microarray: Database Software supporting genomic expression analyses for systems biology
BMC Bioinformatics, 2006Co-Authors: Bruz Marzolf, Eric W Deutsch, Patrick Moss, Michael H Johnson, David Campbell, Timothy GalitskiAbstract:Background The biological information in genomic expression data can be understood, and computationally extracted, in the context of systems of interacting molecules. The automation of this information extraction requires high throughput management and analysis of genomic expression data, and integration of these data with other data types. Results SBEAMS-Microarray , a module of the open-source Systems Biology Experiment Analysis Management System ( SBEAMS ), enables MIAME-compliant storage, management, analysis, and integration of high-throughput genomic expression data. It is interoperable with the Cytoscape network integration, visualization, analysis, and modeling Software platform. Conclusion SBEAMS-Microarray provides end-to-end support for genomic expression analyses for network-based systems biology research.
Dietmar Moch - One of the best experts on this subject based on the ideXlab platform.
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Price indexes for PC Database Software and the value of code compatibility
Research Policy, 1997Co-Authors: Dietmar Harhoff, Dietmar MochAbstract:Changing product quality poses a challenge for the computation of price indexes, in particular in technologically advanced industries. We assess the differences between traditional and quality-corrected indexes by computing hedonic and matched-model price indexes for personal computer Database Software. Our Database covers the price development in Germany from 1986 to 1994. Quality-adjusted Software prices decline by 7.4 percent according to our hedonic index. Surprisingly, a matchedmodel index based on linking the prices of directly comparable program versions decreases even faster than the hedonic index (9.3 percent). This unusual result is apparently caused by the simultaneous selling of old and new versions of a given Software product. The estimation results also confirm the importance of network effects. Code compatibility, i.e. the capability of executing programs written for the dominant Database product, yields a significant price premium. The ability to read and write data in the dominant spreadsheet format (file compatibility) is also associated with higher prices, but the price differential is much smaller than in the
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Price Indexes for PC Database Software and the Value of Code Compatibility
1996Co-Authors: Dietmar Harhoff, Dietmar MochAbstract:Changing product quality poses a challenge for the computation of price indexes, in particular in technologically advanced industries. We assess the differences between traditional and quality-corrected indexes by computing hedonic and matched-model price indexes for personal computer Database Software. Our Database covers the price development in Germany from 1986 to 1994. Quality-adjusted Software prices decline by 7.4 percent according to our hedonic index. Surprisingly, a matchedmodel index based on linking the prices of directly comparable program versions decreases even faster than the hedonic index (9.3 percent). This unusual result is apparently caused by the simultaneous selling of old and new versions of a given Software product. The estimation results also confirm the importance of network effects. Code compatibility, i.e. the capability of executing programs written for the dominant Database product, yields a significant price premium. The ability to read and write data in the dominant spreadsheet format (file compatibility) is also associated with higher prices, but the price differential is much smaller than in the case of code compatibility.
Martin C J Maiden - One of the best experts on this subject based on the ideXlab platform.
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agdbnet antigen sequence Database Software for bacterial typing
BMC Bioinformatics, 2006Co-Authors: Keith A Jolley, Martin C J MaidenAbstract:Background Bacterial typing schemes based on the sequences of genes encoding surface antigens require Databases that provide a uniform, curated, and widely accepted nomenclature of the variants identified. Due to the differences in typing schemes, imposed by the diversity of genes targeted, creating these Databases has typically required the writing of one-off code to link the Database to a web interface. Here we describe agdbNet, widely applicable web Database Software that facilitates simultaneous BLAST querying of multiple loci using either nucleotide or peptide sequences.
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AgdbNet – antigen sequence Database Software for bacterial typing
BMC bioinformatics, 2006Co-Authors: Keith A Jolley, Martin C J MaidenAbstract:Background Bacterial typing schemes based on the sequences of genes encoding surface antigens require Databases that provide a uniform, curated, and widely accepted nomenclature of the variants identified. Due to the differences in typing schemes, imposed by the diversity of genes targeted, creating these Databases has typically required the writing of one-off code to link the Database to a web interface. Here we describe agdbNet, widely applicable web Database Software that facilitates simultaneous BLAST querying of multiple loci using either nucleotide or peptide sequences.
Patrick Moss - One of the best experts on this subject based on the ideXlab platform.
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sbeams microarray Database Software supporting genomic expression analyses for systems biology
BMC Bioinformatics, 2006Co-Authors: Bruz Marzolf, Eric W Deutsch, Patrick Moss, David S Campbell, Michael H Johnson, Timothy GalitskiAbstract:Background The biological information in genomic expression data can be understood, and computationally extracted, in the context of systems of interacting molecules. The automation of this information extraction requires high throughput management and analysis of genomic expression data, and integration of these data with other data types.
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SBEAMS-Microarray: Database Software supporting genomic expression analyses for systems biology
BMC Bioinformatics, 2006Co-Authors: Bruz Marzolf, Eric W Deutsch, Patrick Moss, Michael H Johnson, David Campbell, Timothy GalitskiAbstract:Background The biological information in genomic expression data can be understood, and computationally extracted, in the context of systems of interacting molecules. The automation of this information extraction requires high throughput management and analysis of genomic expression data, and integration of these data with other data types. Results SBEAMS-Microarray , a module of the open-source Systems Biology Experiment Analysis Management System ( SBEAMS ), enables MIAME-compliant storage, management, analysis, and integration of high-throughput genomic expression data. It is interoperable with the Cytoscape network integration, visualization, analysis, and modeling Software platform. Conclusion SBEAMS-Microarray provides end-to-end support for genomic expression analyses for network-based systems biology research.
