Laplace Method

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Chee Ng - One of the best experts on this subject based on the ideXlab platform.

  • a survey of population analysis Methods and software for complex pharmacokinetic and pharmacodynamic models with examples
    Aaps Journal, 2007
    Co-Authors: Robert J Bauer, Serge Guzy, Chee Ng
    Abstract:

    An overview is provided of the present population analysis Methods and an assessment of which software packages are most appropriate for various PK/PD modeling problems. Four PK/PD example problems were solved using the programs NONMEM VI beta version, PDx-MCPEM, S-ADAPT, MONOLIX, and WinBUGS, informally assessed for reasonable accuracy and stability in analyzing these problems. Also, for each program we describe their general interface, ease of use, and abilities. We conclude with discussing which algorithms and software are most suitable for which types of PK/PD problems. NONMEM FO Method is accurate and fast with 2-compartment models, if intra-individual and interindividual variances are small. The NONMEM FOCE Method is slower than FO, but gives accurate population values regardless of size of intra- and interindividual errors. However, if data are very sparse, the NONMEM FOCE Method can lead to inaccurate values, while the Laplace Method can provide more accurate results. The exact EM Methods (performed using S-ADAPT, PDx-MCPEM, and MONOLIX) have greater stability in analyzing complex PK/PD models, and can provide accurate results with sparse or rich data. MCPEM Methods perform more slowly than NONMEM FOCE for simple models, but perform more quickly and stably than NONMEM FOCE for complex models. WinBUGS provides accurate assessments of the population parameters, standard errors and 95% confidence intervals for all examples. Like the MCPEM Methods, WinBUGS's efficiency increases relative to NONMEM when solving the complex PK/PD models.

  • a survey of population analysis Methods and software for complex pharmacokinetic and pharmacodynamic models with examples
    Aaps Journal, 2007
    Co-Authors: Robert J Bauer, Serge Guzy, Chee Ng
    Abstract:

    An overview is provided of the present population analysis Methods and an assessment of which software packages are most appropriate for various PK/PD modeling problems. Four PK/PD example problems were solved using the programs NONMEM VI beta version, PDx-MCPEM, S-ADAPT, MONOLIX, and WinBUGS, informally assessed for reasonable accuracy and stability in analyzing these problems. Also, for each program we describe their general interface, ease of use, and abilities. We conclude with discussing which algorithms and software are most suitable for which types of PK/PD problems. NONMEM FO Method is accurate and fast with 2-compartment models, if intra-individual and interindividual variances are small. The NONMEM FOCE Method is slower than FO, but gives accurate population values regardless of size of intra- and interindividual errors. However, if data are very sparse, the NONMEM FOCE Method can lead to inaccurate values, while the Laplace Method can provide more accurate results. The exact EM Methods (performed using S-ADAPT, PDx-MCPEM, and MONOLIX) have greater stability in analyzing complex PK/PD models, and can provide accurate results with sparse or rich data. MCPEM Methods perform more slowly than NONMEM FOCE for simple models, but perform more quickly and stably than NONMEM FOCE for complex models. WinBUGS provides accurate assessments of the population parameters, standard errors and 95% confidence intervals for all examples. Like the MCPEM Methods, WinBUGS's efficiency increases relative to NONMEM when solving the complex PK/PD models.

Robert J Bauer - One of the best experts on this subject based on the ideXlab platform.

  • a survey of population analysis Methods and software for complex pharmacokinetic and pharmacodynamic models with examples
    Aaps Journal, 2007
    Co-Authors: Robert J Bauer, Serge Guzy, Chee Ng
    Abstract:

    An overview is provided of the present population analysis Methods and an assessment of which software packages are most appropriate for various PK/PD modeling problems. Four PK/PD example problems were solved using the programs NONMEM VI beta version, PDx-MCPEM, S-ADAPT, MONOLIX, and WinBUGS, informally assessed for reasonable accuracy and stability in analyzing these problems. Also, for each program we describe their general interface, ease of use, and abilities. We conclude with discussing which algorithms and software are most suitable for which types of PK/PD problems. NONMEM FO Method is accurate and fast with 2-compartment models, if intra-individual and interindividual variances are small. The NONMEM FOCE Method is slower than FO, but gives accurate population values regardless of size of intra- and interindividual errors. However, if data are very sparse, the NONMEM FOCE Method can lead to inaccurate values, while the Laplace Method can provide more accurate results. The exact EM Methods (performed using S-ADAPT, PDx-MCPEM, and MONOLIX) have greater stability in analyzing complex PK/PD models, and can provide accurate results with sparse or rich data. MCPEM Methods perform more slowly than NONMEM FOCE for simple models, but perform more quickly and stably than NONMEM FOCE for complex models. WinBUGS provides accurate assessments of the population parameters, standard errors and 95% confidence intervals for all examples. Like the MCPEM Methods, WinBUGS's efficiency increases relative to NONMEM when solving the complex PK/PD models.

  • a survey of population analysis Methods and software for complex pharmacokinetic and pharmacodynamic models with examples
    Aaps Journal, 2007
    Co-Authors: Robert J Bauer, Serge Guzy, Chee Ng
    Abstract:

    An overview is provided of the present population analysis Methods and an assessment of which software packages are most appropriate for various PK/PD modeling problems. Four PK/PD example problems were solved using the programs NONMEM VI beta version, PDx-MCPEM, S-ADAPT, MONOLIX, and WinBUGS, informally assessed for reasonable accuracy and stability in analyzing these problems. Also, for each program we describe their general interface, ease of use, and abilities. We conclude with discussing which algorithms and software are most suitable for which types of PK/PD problems. NONMEM FO Method is accurate and fast with 2-compartment models, if intra-individual and interindividual variances are small. The NONMEM FOCE Method is slower than FO, but gives accurate population values regardless of size of intra- and interindividual errors. However, if data are very sparse, the NONMEM FOCE Method can lead to inaccurate values, while the Laplace Method can provide more accurate results. The exact EM Methods (performed using S-ADAPT, PDx-MCPEM, and MONOLIX) have greater stability in analyzing complex PK/PD models, and can provide accurate results with sparse or rich data. MCPEM Methods perform more slowly than NONMEM FOCE for simple models, but perform more quickly and stably than NONMEM FOCE for complex models. WinBUGS provides accurate assessments of the population parameters, standard errors and 95% confidence intervals for all examples. Like the MCPEM Methods, WinBUGS's efficiency increases relative to NONMEM when solving the complex PK/PD models.

V. R. Fatalov - One of the best experts on this subject based on the ideXlab platform.

Serge Guzy - One of the best experts on this subject based on the ideXlab platform.

  • a survey of population analysis Methods and software for complex pharmacokinetic and pharmacodynamic models with examples
    Aaps Journal, 2007
    Co-Authors: Robert J Bauer, Serge Guzy, Chee Ng
    Abstract:

    An overview is provided of the present population analysis Methods and an assessment of which software packages are most appropriate for various PK/PD modeling problems. Four PK/PD example problems were solved using the programs NONMEM VI beta version, PDx-MCPEM, S-ADAPT, MONOLIX, and WinBUGS, informally assessed for reasonable accuracy and stability in analyzing these problems. Also, for each program we describe their general interface, ease of use, and abilities. We conclude with discussing which algorithms and software are most suitable for which types of PK/PD problems. NONMEM FO Method is accurate and fast with 2-compartment models, if intra-individual and interindividual variances are small. The NONMEM FOCE Method is slower than FO, but gives accurate population values regardless of size of intra- and interindividual errors. However, if data are very sparse, the NONMEM FOCE Method can lead to inaccurate values, while the Laplace Method can provide more accurate results. The exact EM Methods (performed using S-ADAPT, PDx-MCPEM, and MONOLIX) have greater stability in analyzing complex PK/PD models, and can provide accurate results with sparse or rich data. MCPEM Methods perform more slowly than NONMEM FOCE for simple models, but perform more quickly and stably than NONMEM FOCE for complex models. WinBUGS provides accurate assessments of the population parameters, standard errors and 95% confidence intervals for all examples. Like the MCPEM Methods, WinBUGS's efficiency increases relative to NONMEM when solving the complex PK/PD models.

  • a survey of population analysis Methods and software for complex pharmacokinetic and pharmacodynamic models with examples
    Aaps Journal, 2007
    Co-Authors: Robert J Bauer, Serge Guzy, Chee Ng
    Abstract:

    An overview is provided of the present population analysis Methods and an assessment of which software packages are most appropriate for various PK/PD modeling problems. Four PK/PD example problems were solved using the programs NONMEM VI beta version, PDx-MCPEM, S-ADAPT, MONOLIX, and WinBUGS, informally assessed for reasonable accuracy and stability in analyzing these problems. Also, for each program we describe their general interface, ease of use, and abilities. We conclude with discussing which algorithms and software are most suitable for which types of PK/PD problems. NONMEM FO Method is accurate and fast with 2-compartment models, if intra-individual and interindividual variances are small. The NONMEM FOCE Method is slower than FO, but gives accurate population values regardless of size of intra- and interindividual errors. However, if data are very sparse, the NONMEM FOCE Method can lead to inaccurate values, while the Laplace Method can provide more accurate results. The exact EM Methods (performed using S-ADAPT, PDx-MCPEM, and MONOLIX) have greater stability in analyzing complex PK/PD models, and can provide accurate results with sparse or rich data. MCPEM Methods perform more slowly than NONMEM FOCE for simple models, but perform more quickly and stably than NONMEM FOCE for complex models. WinBUGS provides accurate assessments of the population parameters, standard errors and 95% confidence intervals for all examples. Like the MCPEM Methods, WinBUGS's efficiency increases relative to NONMEM when solving the complex PK/PD models.

Emmanuel Lesaffre - One of the best experts on this subject based on the ideXlab platform.

  • fully exponential Laplace approximations for the joint modelling of survival and longitudinal data
    Journal of The Royal Statistical Society Series B-statistical Methodology, 2009
    Co-Authors: Dimitris Rizopoulos, Geert Verbeke, Emmanuel Lesaffre
    Abstract:

    Summary. A common objective in longitudinal studies is the joint modelling of a longitudinal response with a time‐to‐event outcome. Random effects are typically used in the joint modelling framework to explain the interrelationships between these two processes. However, estimation in the presence of random effects involves intractable integrals requiring numerical integration. We propose a new computational approach for fitting such models that is based on the Laplace Method for integrals that makes the consideration of high dimensional random‐effects structures feasible. Contrary to the standard Laplace approximation, our Method requires much fewer repeated measurements per individual to produce reliable results.