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Peter A Carr - One of the best experts on this subject based on the ideXlab platform.

  • erratum Open Source Community driven microfluidics with metafluidics
    Nature Biotechnology, 2018
    Co-Authors: David S Kong, Jonathan Babb, Scott T Wick, Ron Weiss, Todd Thorsen, Peter A Carr
    Abstract:

    Nat. Biotechnol. 35, 523–529 (2017); published online 7 June 2017; corrected after print 28 February 2018 In the version of this article initially published, the wrong Creative Commons Attribution license (cc-by-nc rather than cc-by) was inserted. The error has been corrected in the HTML and PDF versions of the article.

  • Open-Source, Community-driven microfluidics with Metafluidics
    Nature Biotechnology, 2017
    Co-Authors: David S Kong, Todd A Thorsen, Jonathan Babb, Scott T Wick, Ron Weiss, Peter A Carr
    Abstract:

    A Community-led initiative will enable users to design, share, refine and innovate fluidic devices. Microfluidic devices have the potential to automate and miniaturize biological experiments, but Open-Source sharing of device designs has lagged behind sharing of other reSources such as software. Synthetic biologists have used microfluidics for DNA assembly, cell-free expression, and cell culture, but a combination of expense, device complexity, and reliance on custom set-ups hampers their widespread adoption. We present Metafluidics, an Open-Source, Community-driven repository that hosts digital design files, assembly specifications, and Open-Source software to enable users to build, configure, and operate a microfluidic device. We use Metafluidics to share designs and fabrication instructions for both a microfluidic ring-mixer device and a 32-channel tabletop microfluidic controller. This device and controller are applied to build genetic circuits using standard DNA assembly methods including ligation, Gateway, Gibson, and Golden Gate. Metafluidics is intended to enable a broad Community of engineers, DIY enthusiasts, and other nontraditional participants with limited fabrication skills to contribute to microfluidic research.

  • Open Source Community driven microfluidics with metafluidics
    Nature Biotechnology, 2017
    Co-Authors: David S Kong, Todd A Thorsen, Jonathan Babb, Scott T Wick, Ron Weiss, Peter A Carr
    Abstract:

    A Community-led initiative will enable users to design, share, refine and innovate fluidic devices.

Thomas Leppelt - One of the best experts on this subject based on the ideXlab platform.

  • pytroll an Open Source Community driven python framework to process earth observation satellite data
    Bulletin of the American Meteorological Society, 2018
    Co-Authors: Martin Raspaud, Adam Dybbroe, Abhay Devasthale, Mikhail Itkin, Ulrich Hamann, Lars Ørum Rasmussen, Esben Stigård Nielsen, Panu Lahtinen, David Hoese, Thomas Leppelt
    Abstract:

    AbstractPyTroll (http://pytroll.org) is a suite of Open-Source easy-to-use Python packages to facilitate processing and efficient sharing of Earth Observation (EO) satellite data. The PyTroll softw...

  • An Open-Source, Community-driven python framework to process earth observation satellite data
    Bulletin of the American Meteorological Society, 2018
    Co-Authors: Martin Raspaud, Adam Dybbroe, Abhay Devasthale, Mikhail Itkin, Ulrich Hamann, Lars Ørum Rasmussen, Esben Stigård Nielsen, Panu Lahtinen, David Hoese, Thomas Leppelt
    Abstract:

    AbstractPyTroll (http://pytroll.org) is a suite of Open Source easy to use Python packages to facilitate processing and efficient sharing of Earth Observation (EO) satellite data. The PyTroll software is both intended for 24/7 real time operations as well as for research and development. PyTroll grew out of the need to provide a resilient and agile platform that can respond quickly to new user needs and new data Sources. PyTroll being Open Source stimulates international collaboration, which is vital with the rapid increase of satellite data information available to the users. The PyTroll software development is strongly user driven and has grown over the past eight years from a collaborative effort between the Danish and Swedish National Meteorological Services to encompass a worldwide Community with active contributors. PyTroll is being used operationally at least in the National Meteorological Services of Denmark, Norway, Sweden, Finland, Germany, Switzerland, Italy, Estonia and Latvia. However, given its simplicity, minimal demand on user reSources and Community-driven approach, it also encourages and facilitates usage of EO data for individual applications. While PyTroll was originally developed to cater the needs of atmospheric remote sensing Community, it could equally be useful for land and ocean applications, and within hydrology. This article provides an overview of PyTroll giving examples showing the capability of some of the core packages.

David S Kong - One of the best experts on this subject based on the ideXlab platform.

  • erratum Open Source Community driven microfluidics with metafluidics
    Nature Biotechnology, 2018
    Co-Authors: David S Kong, Jonathan Babb, Scott T Wick, Ron Weiss, Todd Thorsen, Peter A Carr
    Abstract:

    Nat. Biotechnol. 35, 523–529 (2017); published online 7 June 2017; corrected after print 28 February 2018 In the version of this article initially published, the wrong Creative Commons Attribution license (cc-by-nc rather than cc-by) was inserted. The error has been corrected in the HTML and PDF versions of the article.

  • Open-Source, Community-driven microfluidics with Metafluidics
    Nature Biotechnology, 2017
    Co-Authors: David S Kong, Todd A Thorsen, Jonathan Babb, Scott T Wick, Ron Weiss, Peter A Carr
    Abstract:

    A Community-led initiative will enable users to design, share, refine and innovate fluidic devices. Microfluidic devices have the potential to automate and miniaturize biological experiments, but Open-Source sharing of device designs has lagged behind sharing of other reSources such as software. Synthetic biologists have used microfluidics for DNA assembly, cell-free expression, and cell culture, but a combination of expense, device complexity, and reliance on custom set-ups hampers their widespread adoption. We present Metafluidics, an Open-Source, Community-driven repository that hosts digital design files, assembly specifications, and Open-Source software to enable users to build, configure, and operate a microfluidic device. We use Metafluidics to share designs and fabrication instructions for both a microfluidic ring-mixer device and a 32-channel tabletop microfluidic controller. This device and controller are applied to build genetic circuits using standard DNA assembly methods including ligation, Gateway, Gibson, and Golden Gate. Metafluidics is intended to enable a broad Community of engineers, DIY enthusiasts, and other nontraditional participants with limited fabrication skills to contribute to microfluidic research.

  • Open Source Community driven microfluidics with metafluidics
    Nature Biotechnology, 2017
    Co-Authors: David S Kong, Todd A Thorsen, Jonathan Babb, Scott T Wick, Ron Weiss, Peter A Carr
    Abstract:

    A Community-led initiative will enable users to design, share, refine and innovate fluidic devices.

Martin Raspaud - One of the best experts on this subject based on the ideXlab platform.

  • pytroll an Open Source Community driven python framework to process earth observation satellite data
    Bulletin of the American Meteorological Society, 2018
    Co-Authors: Martin Raspaud, Adam Dybbroe, Abhay Devasthale, Mikhail Itkin, Ulrich Hamann, Lars Ørum Rasmussen, Esben Stigård Nielsen, Panu Lahtinen, David Hoese, Thomas Leppelt
    Abstract:

    AbstractPyTroll (http://pytroll.org) is a suite of Open-Source easy-to-use Python packages to facilitate processing and efficient sharing of Earth Observation (EO) satellite data. The PyTroll softw...

  • An Open-Source, Community-driven python framework to process earth observation satellite data
    Bulletin of the American Meteorological Society, 2018
    Co-Authors: Martin Raspaud, Adam Dybbroe, Abhay Devasthale, Mikhail Itkin, Ulrich Hamann, Lars Ørum Rasmussen, Esben Stigård Nielsen, Panu Lahtinen, David Hoese, Thomas Leppelt
    Abstract:

    AbstractPyTroll (http://pytroll.org) is a suite of Open Source easy to use Python packages to facilitate processing and efficient sharing of Earth Observation (EO) satellite data. The PyTroll software is both intended for 24/7 real time operations as well as for research and development. PyTroll grew out of the need to provide a resilient and agile platform that can respond quickly to new user needs and new data Sources. PyTroll being Open Source stimulates international collaboration, which is vital with the rapid increase of satellite data information available to the users. The PyTroll software development is strongly user driven and has grown over the past eight years from a collaborative effort between the Danish and Swedish National Meteorological Services to encompass a worldwide Community with active contributors. PyTroll is being used operationally at least in the National Meteorological Services of Denmark, Norway, Sweden, Finland, Germany, Switzerland, Italy, Estonia and Latvia. However, given its simplicity, minimal demand on user reSources and Community-driven approach, it also encourages and facilitates usage of EO data for individual applications. While PyTroll was originally developed to cater the needs of atmospheric remote sensing Community, it could equally be useful for land and ocean applications, and within hydrology. This article provides an overview of PyTroll giving examples showing the capability of some of the core packages.

Scott T Wick - One of the best experts on this subject based on the ideXlab platform.

  • erratum Open Source Community driven microfluidics with metafluidics
    Nature Biotechnology, 2018
    Co-Authors: David S Kong, Jonathan Babb, Scott T Wick, Ron Weiss, Todd Thorsen, Peter A Carr
    Abstract:

    Nat. Biotechnol. 35, 523–529 (2017); published online 7 June 2017; corrected after print 28 February 2018 In the version of this article initially published, the wrong Creative Commons Attribution license (cc-by-nc rather than cc-by) was inserted. The error has been corrected in the HTML and PDF versions of the article.

  • Open-Source, Community-driven microfluidics with Metafluidics
    Nature Biotechnology, 2017
    Co-Authors: David S Kong, Todd A Thorsen, Jonathan Babb, Scott T Wick, Ron Weiss, Peter A Carr
    Abstract:

    A Community-led initiative will enable users to design, share, refine and innovate fluidic devices. Microfluidic devices have the potential to automate and miniaturize biological experiments, but Open-Source sharing of device designs has lagged behind sharing of other reSources such as software. Synthetic biologists have used microfluidics for DNA assembly, cell-free expression, and cell culture, but a combination of expense, device complexity, and reliance on custom set-ups hampers their widespread adoption. We present Metafluidics, an Open-Source, Community-driven repository that hosts digital design files, assembly specifications, and Open-Source software to enable users to build, configure, and operate a microfluidic device. We use Metafluidics to share designs and fabrication instructions for both a microfluidic ring-mixer device and a 32-channel tabletop microfluidic controller. This device and controller are applied to build genetic circuits using standard DNA assembly methods including ligation, Gateway, Gibson, and Golden Gate. Metafluidics is intended to enable a broad Community of engineers, DIY enthusiasts, and other nontraditional participants with limited fabrication skills to contribute to microfluidic research.

  • Open Source Community driven microfluidics with metafluidics
    Nature Biotechnology, 2017
    Co-Authors: David S Kong, Todd A Thorsen, Jonathan Babb, Scott T Wick, Ron Weiss, Peter A Carr
    Abstract:

    A Community-led initiative will enable users to design, share, refine and innovate fluidic devices.