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Miguel A. Pardal - One of the best experts on this subject based on the ideXlab platform.

  • Vertical patterns of ichthyoplankton at the interface between a temperate estuary and adjacent coastal waters: Seasonal relation to diel and tidal cycles
    Journal of Marine Systems, 2012
    Co-Authors: Ana Lígia Primo, Ulisses Miranda Azeiteiro, Sónia Cotrim Marques, Miguel A. Pardal
    Abstract:

    Vertical distribution and migration pattern of ichthyoplankton assemblage in the Mondego estuary were investigated in relation to diel and tidal cycle. Summer and winter communities were sampled, at surface and bottom, over a diel cycle during spring and neap tides at a fixed station at the mouth of the estuary. Summer presented higher larvae density mainly of Pomatoschistus spp., Gobius niger and Parablennius pilicornis. Main species in winter assemblages were Pomatoschistus spp. and Sardina pilchardus. There were no differences between depth stratums across diel or tide cycle. Nevertheless, main species larval densities showed significant periodic variation associated with tide (M2) and diel (K1) cycles presenting generally, higher density at night and around low tide. Conversely, vertical patterns observed could not be related with diel or tidal cycle. Tough, main species presented some extent of vertical migration. Vertical patterns observed appear to be related to seasonal stratification and river flow, increasing amplitude during periods of less stratification and lower water currents. Present study provides a better understanding of ichthyoplankton vertical movement patterns and of small scale dynamics at the interface of two coastal European systems.

  • Strategies of Pomatoschistus minutus and Pomatoschistus microps to cope with environmental instability
    Estuarine Coastal and Shelf Science, 2007
    Co-Authors: M. Dolbeth, Ricardo A. Leitão, Filipe Martinho, Henrique N. Cabral, Miguel A. Pardal
    Abstract:

    The populations of Pomatoschistus minutus and Pomatoschistus microps were studied from June 2003 to May 2006 in the Mondego estuary, in order to understand the ability of these species to withstand environmental variability. During this period a severe drought occurred (2005), with consequent lower freshwater runoff and higher salinity incursion into the estuary. Occasional abnormal high water temperatures were observed in 2003 and 2005. The fish populations were sampled monthly along an estuarine gradient, from which population density, structure, growth and biomass production was assessed. Pomatoschistus minutus distributed mainly at the most saline downstream area, while P. microps distributed within the whole estuary, in accordance to the salinity and temperature tolerances for the species. A clear decrease in density and production was observed for P. minutus in the dry year, with non-expressive recruitments and the quick disappearance of the parental cohort. For P. microps, the decrease was not so pronounced. No direct effects were attributable to the salinity and temperatures variations (resulting from the drought and high temperatures). Yet, higher predation pressure on P. minutus hypothesis was raised, as the salinity incursion increased the piscivorous marine adventitious species in the downstream areas. Pomatoschistus microps benefited from a wider temperature and salinity range tolerance, allowing the species to occupy different areas in the estuary and by this seemed better able to cope with the environmental conditionings during the 3-year studied period.

  • Feeding ecology, population structure and distribution of Pomatoschistus microps (Krøyer, 1838) and Pomatoschistus minutus (Pallas, 1770) in a temperate estuary, Portugal
    Estuarine Coastal and Shelf Science, 2005
    Co-Authors: Ricardo A. Leitão, Filipe Martinho, João M. Neto, Henrique N. Cabral, João Carlos Marques, Miguel A. Pardal
    Abstract:

    The feeding ecology, growth and spatial–temporal abundance and distribution of Pomatoschistus microps (Kroyer, 1838) and Pomatoschistus minutus (Pallas, 1770) were studied between June 2003 and June 2004, based on beam trawl surveys and macrobenthic samples conducted in the Mondego estuary, Portugal. Polychaetes, molluscs and amphipods were the most important items in the diet of P. microps, while for P. minutus the dominant preys were polychaetes, mysids and decapods. Pomatoschistus microps' recruitment lasted for six months and was composed of three new cohorts per year. Pomatoschistus minutus had an uncommon long reproductive season, from April to November, and population segregation was found, corresponding to the two reproductive peaks. Populations of both species were composed mainly of 0-group individuals with sand gobies presenting a more extended life span. In the Mondego estuary, inter- and intra-specific spatial segregation occurred between the two species and between the 0+ and 1+ age groups of P. microps.

Filip Volckaert - One of the best experts on this subject based on the ideXlab platform.

  • Differential modes of selection on the rhodopsin gene in coastal Baltic and North Sea populations of the sand goby, Pomatoschistus minutus.
    Molecular ecology, 2010
    Co-Authors: Maarten Larmuseau, Joost A. M. Raeymaekers, Kim Vancampenhout, Jeroen Van Houdt, Filip Volckaert
    Abstract:

    An excellent model to elucidate the mechanisms and importance of evolution in the marine environment is the spectral tuning mechanism of the visual pigment in vertebrates. In the sand goby Pomatoschistus minutus (Teleostei; Gobiidae), a distribution-wide study showed that spatial variation at the rhodopsin gene (RH1) matches the characteristics of specific light environments. This match suggests that populations are locally adapted to selective light regimes targeting the RH1 gene. If so, then the direction of selection should depend on the regional spatial and temporal stability of the light conditions. We tested this prediction by comparing goby populations from two regions: the Baltic Sea, characterized by divergent, but temporally stable light conditions, and the North Sea, characterized by locally heterogeneous and temporally variable light conditions. RH1 sequences of 491 Pomatoschistus minutus individuals from 15 locations were analysed. We found that variation at the RH1 gene in the Baltic populations showed signatures of diversifying selection, whereas the RH1 gene in the North Sea showed signatures of stabilizing selection. These different modes of selection are consistent with the regional light conditions and hence support our predictions, but may also be influenced by migration between the open sea and more turbid estuarine environments. An interesting observation is that within one gene, synonymous and non-synonymous SNPs show a totally different pattern between populations. Population differentiation based on non-synonymous SNPs of the RH1 gene correlated with spectral variation of the local environment of the sand goby populations. In contrast, the differentiation based on synonymous SNPs of RH1 reflects more the neutral historical pattern of the species.

  • To see in different seas: spatial variation in the rhodopsin gene of the sand goby (Pomatoschistus minutus)
    Molecular ecology, 2009
    Co-Authors: Maarten Larmuseau, Joost A. M. Raeymaekers, Kevin G. Ruddick, Jeroen K. J. Van Houdt, Filip Volckaert
    Abstract:

    Aquatic organisms living in a range of photic environments require specific mechanisms to tune their visual pigments. Maximum absorbance (lambda(max)) of retinal rods in populations of the marine demersal sand goby, (Pomatoschistus minutus; Gobiidae, Teleostei) correlates with the local optic environment. It has been shown that this is not regulated through a physiological response by exchanging the rhodopsin chromophore. To test for evolutionary adaptation, the sequence of the rhodopsin (RH1) gene was analysed in 165 Pomatoschistus minutus individuals from seven populations across its distribution range. Analysis showed a high level of intraspecific polymorphism at the RH1 gene, including nonsynonymous mutations on amino acids, known as spectral tuning sites. Population differentiation at these sites was in agreement with the observed differentiation in lambda(max) values. Analyses of d(N)/d(S) substitution rate ratios and likelihood ratio tests under site-specific models detected a significant signal of positive Darwinian selection on the RH1 gene. A strong discrepancy in differentiation was noticed between RH1 gene variation and the presumably neutral microsatellites and mitochondrial data. Samples did not cluster according to geographical or historical proximity with regards to RH1, but according to the general photic conditions of the habitat environment of the sand goby. This study highlights the usefulness of sensory genes, like rhodopsin, for studying the characteristics of local adaptation in marine nonmodel organisms.

  • speciation and host parasite relationships in the parasite genus gyrodactylus monogenea platyhelminthes infecting gobies of the genus Pomatoschistus gobiidae teleostei
    International Journal for Parasitology, 2003
    Co-Authors: Tine Huyse, Vanessa Audenaert, Filip Volckaert
    Abstract:

    Abstract Using species-level phylogenies, the speciation mode of Gyrodactylus species infecting a single host genus was evaluated. Eighteen Gyrodactylus species were collected from gobies of the genus Pomatoschistus and sympatric fish species across the distribution range of the hosts. The V4 region of the ssrRNA and the internal transcribed spacers encompassing the 5.8S rRNA gene were sequenced; by including published sequences a total of 30 species representing all subgenera were used in the data analyses. The molecular phylogeny did not support the morphological groupings into subgenera as based on the excretory system, suggesting that the genus needs systematic revisions. Paraphyly of the total Gyrodactylus fauna of the gobies indicates that at least two independent colonisation events were involved, giving rise to two separate groups, belonging to the subgenus Mesonephrotus and Paranephrotus , respectively. The most recent association probably originated from a host switching event from Gyrodactylus arcuatus , which parasitises three-spined stickleback, onto Pomatoschistus gobies. These species are highly host-specific and form a monophyletic group, two possible ‘signatures’ of co-speciation. Host specificity was lower in the second group. The colonising capacity of these species is illustrated by a host jump from gobiids to another fish order (Anguilliformes), supporting the hypothesis of a European origin of Gyrodactylus anguillae and its intercontinental introduction by the eel trade. Thus, allopatric speciation seems to be the dominant mode of speciation in this host–parasite system, with a possible case of sympatric speciation.

  • Speciation and host–parasite relationships in the parasite genus Gyrodactylus (Monogenea, Platyhelminthes) infecting gobies of the genus Pomatoschistus (Gobiidae, Teleostei)
    International journal for parasitology, 2003
    Co-Authors: Tine Huyse, Vanessa Audenaert, Filip Volckaert
    Abstract:

    Abstract Using species-level phylogenies, the speciation mode of Gyrodactylus species infecting a single host genus was evaluated. Eighteen Gyrodactylus species were collected from gobies of the genus Pomatoschistus and sympatric fish species across the distribution range of the hosts. The V4 region of the ssrRNA and the internal transcribed spacers encompassing the 5.8S rRNA gene were sequenced; by including published sequences a total of 30 species representing all subgenera were used in the data analyses. The molecular phylogeny did not support the morphological groupings into subgenera as based on the excretory system, suggesting that the genus needs systematic revisions. Paraphyly of the total Gyrodactylus fauna of the gobies indicates that at least two independent colonisation events were involved, giving rise to two separate groups, belonging to the subgenus Mesonephrotus and Paranephrotus , respectively. The most recent association probably originated from a host switching event from Gyrodactylus arcuatus , which parasitises three-spined stickleback, onto Pomatoschistus gobies. These species are highly host-specific and form a monophyletic group, two possible ‘signatures’ of co-speciation. Host specificity was lower in the second group. The colonising capacity of these species is illustrated by a host jump from gobiids to another fish order (Anguilliformes), supporting the hypothesis of a European origin of Gyrodactylus anguillae and its intercontinental introduction by the eel trade. Thus, allopatric speciation seems to be the dominant mode of speciation in this host–parasite system, with a possible case of sympatric speciation.

C. Dieter Zander - One of the best experts on this subject based on the ideXlab platform.

  • Four-year monitoring of parasite communities in gobiid fishes of the south-western Baltic
    Parasitology Research, 2004
    Co-Authors: C. Dieter Zander
    Abstract:

    The parasite infracommunity of five goby species ( Pomatoschistus minutus, P. pictus, P.microps, Gobiusculus flavescens, Gobius niger ) from the south-western Baltic was investigated during spring, summer and autumn of the years 1997–2000. The mean parasite species number in single hosts was high, ranging between 1.1 ( P. minutus ), 2.1 ( P. pictus ) to even 3.3 ( P. microps ). Gobius niger is the only host which lives longer than a year and is infested by almost identical parasites for longer times, i.e. the parasite species composition has greater homogeneity. Most intensity of infestation values peaked in summer and were lowest in autumn; only a few exceptions were found in spring or autumn. Only the Digenea Podocotyle atomon and Cryptocotyle concavum were abundant enough to show a clear seasonal fluctuation in Pomatoschistus minutus, P. pictus and Gobiusculus flavescens . Aphalloides timmi and Apatemon gracilis (Digenea) also attained high intensities in P. microps . These four parasite species and, additionally, Cryptocotyle lingua (Digenea), and Hysterothylacium sp. (Nematoda) can be strongly accumulated from either prey or free-swimming larvae and, thus, decisively influence the structure of the infracommunities. Due to selection by filter mechanisms, rare parasites settle rather by chance after competition with other species. The number of parasite species usually increased significantly with host growth. As many as four parasite species were found at the same time in the intestinal tract microhabitat of Gobius niger and P. minutus ; at most three parasite species were present on the skin and fins or in the body cavity. The level of infection is due to the respective life history patterns and the kinds of prey, which harbour different parasites as intermediate hosts. Additionally, it depends on the time of appearance of goby offspring in the course of the year.

  • Four-year monitoring of parasite communities in gobiid fishes of the south-western Baltic
    Parasitology Research, 2003
    Co-Authors: C. Dieter Zander
    Abstract:

    The parasite communities of goby species (Teleostei, Percomorphi) from the south-western Baltic Sea were investigated from 1997 to 2000 in three different seasons. In total, 30 parasite species were found in the guild of four goby spp. from Dahmeshöved (Lübeck Bight). The component community of Pomatoschistus minutus comprised 22, Pomatoschistus pictus 20, Gobiusculus flavescens 18 and Gobius niger 14 parasite species, whereas Pomatoschistus microps from the Salzhaff (Mecklenburg Bight) harboured 24 species. The digenean Podocotyle atomon (ingested with prey) and Cryptocotyle concavum (active penetration) were the most common parasites. Cryptocotyle lingua and the nematode Hysterothylacium sp. in Gobius niger as well as the specialists Aphalloides timmi and Apatemon gracilis (Digenea) in Pomatoschistus microps were also very abundant. There were large changes in the parasite communities within the years as well as between the seasons of a year; only Gobius niger presented rather homogeneous communities. The ratio of core parasite species in the hosts was at most 28% ( Gobiusculus flavescens ) and at least 9% ( Gobius niger ). The core species can attain their maximum values at different seasons, which is not only influenced by the parasite but also by the host species. It is concluded that the composition of parasite communities was predominantly determined by the ways of life of the host as well as of the parasite species. Another important factor is the population density of intermediate hosts.

Patrick Berrebi - One of the best experts on this subject based on the ideXlab platform.

  • Distribution and hybridization of two sedentary gobies (Pomatoschistus microps and Pomatoschistus marmoratus) in the lagoons of southern France
    Scientia Marina, 2020
    Co-Authors: Patrick Berrebi, Marielle Trébuchon
    Abstract:

    Pomatoschistus marmoratus and Pomatoschistus microps are small sedentary gobies inhabiting the lagoons of European Mediterranean and Atlantic coasts. Along the French Mediterranean coast their respective geographical distribution is not precisely known, in part because they are cryptic species. In this study, 512 gobies of both species were caught as 17 samples in 12 lagoons of the Gulf of Lion on the French Mediterranean coast. They were genotyped at six microsatellite loci and investigated statistically using multidimensional analyses, Bayesian assignment (Structure) and NewHybrids classification. This allowed the contrasted distribution of each species (P. microps in the east, P. marmoratus in the west) to be described, with several exceptions. Neither geographic structure nor isolation by distance was detected among differentiated populations of each species. The suggested mechanism is a deep sedentary behaviour associated with foundations following extinctions. The two species are sympatric or even in syntopy in five or six sampled lagoons producing rare fertile hybrids.

  • New light on the evolutionary history of the common goby (Pomatoschistus microps) with an emphasis on colonization processes in the Mediterranean Sea.
    PloS one, 2014
    Co-Authors: Christelle Tougard, Joy Folly, Patrick Berrebi
    Abstract:

    Through the study of the phylogeographic structure and demographic history of the common goby, Pomatoschistus microps, the influence of Quaternary climatic changes on the evolutionary history of coastal and marine fishes is investigated. Because of its sedentary life cycle in Mediterranean lagoons, it is also a good model to study more specifically if the formation of lagoons during the Holocene had an impact on population structure and demography. Mitochondrial sequences of Northeastern Atlantic and Western Mediterranean specimens were used for phylogenetic reconstructions as well as divergence time estimates, demographic history and population structure analyses. Pomatoschistus microps was a highly supported monophyletic clade including four lineages. It may have appeared 77,000 yr ago, and the divergence of its lineages likely occured shortly thereafter (between 61,000 and 54,000 yr). Most lineages had polytomic topologies, low nucleotide diversity and demographic analyses providing evidence of population expansion. Each lineage was characterized by a large number of private haplotypes. Most haplotypes found in Mediterranean localities were endemic, and one was dominant. Complex reticulated relationships connecting North European, Atlantic and Mediterranean haplotypes were observed. Moderate to high population structure was underlined. Contrary to previous published studies, no significant differentiation was observed between Atlantic and Mediterranean populations, indicating that the Gibraltar Strait is not a phylogeographic break for P. microps. Indeed, molecular dating combined with the tree topologies, phylogeographic and demographic analyses as well as high haplotype diversity underline a recent and rapid population divergence during the last glacial. However, population structure indicates that differentiation is an ongoing process. From an ancestral population trapped in the Atlantic, this goby colonized first northern Europe and later the Mediterranean Sea. Shared haplotypes could have dispersed in the western Mediterranean basin before the lagoon formation, while most private haplotypes, evidencing a recent isolation, probably diverged in lagoons after their closure.

  • Isolation of microsatellite loci and cross-species amplifications in three gobiid fish of the genus Pomatoschistus
    Molecular Ecology Notes, 2006
    Co-Authors: Patrick Berrebi, Bernard Lasserre, Federica Barbisan, Lorenzo Zane
    Abstract:

    Gobiids of the genus Pomatoschistus are increasingly being investigated as models for adaptation to coastal environments and for mating system studies. Among the dozen currently analysed species, microsatellite primers have been characterized only for Pomatoschistus minutus. This paper describes seven new polymorphic loci isolated from Pomatoschistus marmoratus and Pomatoschistus microps, two species that hybridize. Cross-species amplification was tested for these new loci, together with seven already published P. minutus loci. Systematic amplification of samples of each of the three species provided a first indication of their polymorphism.

  • Isolation of microsatellite loci and cross‐species amplifications in three gobiid fish of the genus Pomatoschistus
    Molecular Ecology Notes, 2006
    Co-Authors: Patrick Berrebi, Bernard Lasserre, Federica Barbisan, Lorenzo Zane
    Abstract:

    Gobiids of the genus Pomatoschistus are increasingly being investigated as models for adaptation to coastal environments and for mating system studies. Among the dozen currently analysed species, microsatellite primers have been characterized only for Pomatoschistus minutus. This paper describes seven new polymorphic loci isolated from Pomatoschistus marmoratus and Pomatoschistus microps, two species that hybridize. Cross-species amplification was tested for these new loci, together with seven already published P. minutus loci. Systematic amplification of samples of each of the three species provided a first indication of their polymorphism.

  • Differential distribution of the two cryptic species, Pomatoschistus microps and P. marmoratus, in the lagoons of southern France, with an emphasis on the genetic organisation of P. microps
    Estuarine Coastal and Shelf Science, 2005
    Co-Authors: Patrick Berrebi, Pascal Rodriguez, Jean-antoine Tomasini, Ghislaine Cattaneo-berrebi, Alain J. Crivelli
    Abstract:

    The presence and the distribution of two cryptic sedentary gobies, Pomatoschistus microps and Pomatoschistus marmoratus, were investigated in several lagoons stretching along the Golfe du Lion, southern France Mediterranean coast, and Corsica. Pomatoschistus microps is the only sedentary Pomatoschistus species in two shallow lagoons with large variations of salinity and temperature. In contrast, P. marmoratus, another sedentary species, can be found preferentially in a deep salty lagoon with small salinity variations. Both species occur sympatrically in the Rhone Delta and hybridise, producing fertile offspring. Using allozymes, competition, linked to fitness, is invoked to explain the distribution pattern of these sibling species.

Ola Svensson - One of the best experts on this subject based on the ideXlab platform.