The Experts below are selected from a list of 30012 Experts worldwide ranked by ideXlab platform
Lee Whitmore - One of the best experts on this subject based on the ideXlab platform.
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pcddb new developments at the protein circular dichroism data bank
Nucleic Acids Research, 2017Co-Authors: Lee Whitmore, Robert W. Janes, Andrew J. Miles, Lazaros Mavridis, B A WallaceAbstract:The Protein Circular Dichroism Data Bank (PCDDB) has been in operation for more than 5 years as a Public Repository for archiving circular dichroism spectroscopic data and associated bioinformatics and experimental metadata. Since its inception, many improvements and new developments have been made in data display, searching algorithms, data formats, data content, auxillary information, and validation techniques, as well as, of course, an increase in the number of holdings. It provides a site (http://pcddb.cryst.bbk.ac.uk) for authors to deposit experimental data as well as detailed information on methods and calculations associated with published work. It also includes links for each entry to bioinformatics databases. The data are freely available to accessors either as single files or as complete data bank downloads. The PCDDB has found broad usage by the structural biology, bioinformatics, analytical and pharmaceutical communities, and has formed the basis for new software and methods developments.
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PCDDB: the Protein Circular Dichroism Data Bank, a Repository for circular dichroism spectral and metadata
Nucleic Acids Research, 2010Co-Authors: Lee Whitmore, Robert W. Janes, Benjamin Woollett, Andrew J. Miles, D. P. Klose, Bonnie A. WallaceAbstract:The Protein Circular Dichroism Data Bank (PCDDB) is a Public Repository that archives and freely distributes circular dichroism (CD) and synchrotron radiation CD (SRCD) spectral data and their associated experimental metadata. All entries undergo validation and curation procedures to ensure completeness, consistency and quality of the data included. A web-based interface enables users to browse and query sample types, sample conditions, experimental parameters and provides spectra in both graphical display format and as downloadable text files. The entries are linked, when appropriate, to primary sequence (UniProt) and structural (PDB) databases, as well as to secondary databases such as the Enzyme Commission functional classification database and the CATH fold classification database, as well as to literature citations. The PCDDB is available at: http://pcddb.cryst.bbk.ac.uk.
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The Protein Circular Dichroism Data Bank, A Web-Based Site for Access to Circular Dichroism Spectroscopic Data
Structure, 2010Co-Authors: Lee Whitmore, Robert W. Janes, Benjamin Woollett, Andrew J. Miles, Bonnie A. WallaceAbstract:Summary The Protein Circular Dichroism Data Bank (PCDDB) is a newly released resource for structural biology. It is a web-accessible (http://pcddb.cryst.bbk.ac.uk) data bank for circular dichroism (CD) and synchrotron radiation circular dichroism (SRCD) spectra and their associated experimental and secondary metadata, with links to protein sequence and structure data banks. It is designed to provide a Public Repository for CD spectroscopic data on macromolecules, to parallel the Protein Data Bank (PDB) for crystallographic, electron microscopic, and nuclear magnetic resonance spectroscopic data. Similarly to the PDB, it includes validation checking procedures to ensure good practice and the integrity of the deposited data. This paper reports on the first Public release of the PCDDB, which provides access to spectral data that comprise standard reference datasets.
Bonnie A. Wallace - One of the best experts on this subject based on the ideXlab platform.
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PCDDB: the Protein Circular Dichroism Data Bank, a Repository for circular dichroism spectral and metadata
Nucleic Acids Research, 2010Co-Authors: Lee Whitmore, Robert W. Janes, Benjamin Woollett, Andrew J. Miles, D. P. Klose, Bonnie A. WallaceAbstract:The Protein Circular Dichroism Data Bank (PCDDB) is a Public Repository that archives and freely distributes circular dichroism (CD) and synchrotron radiation CD (SRCD) spectral data and their associated experimental metadata. All entries undergo validation and curation procedures to ensure completeness, consistency and quality of the data included. A web-based interface enables users to browse and query sample types, sample conditions, experimental parameters and provides spectra in both graphical display format and as downloadable text files. The entries are linked, when appropriate, to primary sequence (UniProt) and structural (PDB) databases, as well as to secondary databases such as the Enzyme Commission functional classification database and the CATH fold classification database, as well as to literature citations. The PCDDB is available at: http://pcddb.cryst.bbk.ac.uk.
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The Protein Circular Dichroism Data Bank, A Web-Based Site for Access to Circular Dichroism Spectroscopic Data
Structure, 2010Co-Authors: Lee Whitmore, Robert W. Janes, Benjamin Woollett, Andrew J. Miles, Bonnie A. WallaceAbstract:Summary The Protein Circular Dichroism Data Bank (PCDDB) is a newly released resource for structural biology. It is a web-accessible (http://pcddb.cryst.bbk.ac.uk) data bank for circular dichroism (CD) and synchrotron radiation circular dichroism (SRCD) spectra and their associated experimental and secondary metadata, with links to protein sequence and structure data banks. It is designed to provide a Public Repository for CD spectroscopic data on macromolecules, to parallel the Protein Data Bank (PDB) for crystallographic, electron microscopic, and nuclear magnetic resonance spectroscopic data. Similarly to the PDB, it includes validation checking procedures to ensure good practice and the integrity of the deposited data. This paper reports on the first Public release of the PCDDB, which provides access to spectral data that comprise standard reference datasets.
Robert W. Janes - One of the best experts on this subject based on the ideXlab platform.
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pcddb new developments at the protein circular dichroism data bank
Nucleic Acids Research, 2017Co-Authors: Lee Whitmore, Robert W. Janes, Andrew J. Miles, Lazaros Mavridis, B A WallaceAbstract:The Protein Circular Dichroism Data Bank (PCDDB) has been in operation for more than 5 years as a Public Repository for archiving circular dichroism spectroscopic data and associated bioinformatics and experimental metadata. Since its inception, many improvements and new developments have been made in data display, searching algorithms, data formats, data content, auxillary information, and validation techniques, as well as, of course, an increase in the number of holdings. It provides a site (http://pcddb.cryst.bbk.ac.uk) for authors to deposit experimental data as well as detailed information on methods and calculations associated with published work. It also includes links for each entry to bioinformatics databases. The data are freely available to accessors either as single files or as complete data bank downloads. The PCDDB has found broad usage by the structural biology, bioinformatics, analytical and pharmaceutical communities, and has formed the basis for new software and methods developments.
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PCDDB: the Protein Circular Dichroism Data Bank, a Repository for circular dichroism spectral and metadata
Nucleic Acids Research, 2010Co-Authors: Lee Whitmore, Robert W. Janes, Benjamin Woollett, Andrew J. Miles, D. P. Klose, Bonnie A. WallaceAbstract:The Protein Circular Dichroism Data Bank (PCDDB) is a Public Repository that archives and freely distributes circular dichroism (CD) and synchrotron radiation CD (SRCD) spectral data and their associated experimental metadata. All entries undergo validation and curation procedures to ensure completeness, consistency and quality of the data included. A web-based interface enables users to browse and query sample types, sample conditions, experimental parameters and provides spectra in both graphical display format and as downloadable text files. The entries are linked, when appropriate, to primary sequence (UniProt) and structural (PDB) databases, as well as to secondary databases such as the Enzyme Commission functional classification database and the CATH fold classification database, as well as to literature citations. The PCDDB is available at: http://pcddb.cryst.bbk.ac.uk.
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The Protein Circular Dichroism Data Bank, A Web-Based Site for Access to Circular Dichroism Spectroscopic Data
Structure, 2010Co-Authors: Lee Whitmore, Robert W. Janes, Benjamin Woollett, Andrew J. Miles, Bonnie A. WallaceAbstract:Summary The Protein Circular Dichroism Data Bank (PCDDB) is a newly released resource for structural biology. It is a web-accessible (http://pcddb.cryst.bbk.ac.uk) data bank for circular dichroism (CD) and synchrotron radiation circular dichroism (SRCD) spectra and their associated experimental and secondary metadata, with links to protein sequence and structure data banks. It is designed to provide a Public Repository for CD spectroscopic data on macromolecules, to parallel the Protein Data Bank (PDB) for crystallographic, electron microscopic, and nuclear magnetic resonance spectroscopic data. Similarly to the PDB, it includes validation checking procedures to ensure good practice and the integrity of the deposited data. This paper reports on the first Public release of the PCDDB, which provides access to spectral data that comprise standard reference datasets.
Andrew J. Miles - One of the best experts on this subject based on the ideXlab platform.
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pcddb new developments at the protein circular dichroism data bank
Nucleic Acids Research, 2017Co-Authors: Lee Whitmore, Robert W. Janes, Andrew J. Miles, Lazaros Mavridis, B A WallaceAbstract:The Protein Circular Dichroism Data Bank (PCDDB) has been in operation for more than 5 years as a Public Repository for archiving circular dichroism spectroscopic data and associated bioinformatics and experimental metadata. Since its inception, many improvements and new developments have been made in data display, searching algorithms, data formats, data content, auxillary information, and validation techniques, as well as, of course, an increase in the number of holdings. It provides a site (http://pcddb.cryst.bbk.ac.uk) for authors to deposit experimental data as well as detailed information on methods and calculations associated with published work. It also includes links for each entry to bioinformatics databases. The data are freely available to accessors either as single files or as complete data bank downloads. The PCDDB has found broad usage by the structural biology, bioinformatics, analytical and pharmaceutical communities, and has formed the basis for new software and methods developments.
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PCDDB: the Protein Circular Dichroism Data Bank, a Repository for circular dichroism spectral and metadata
Nucleic Acids Research, 2010Co-Authors: Lee Whitmore, Robert W. Janes, Benjamin Woollett, Andrew J. Miles, D. P. Klose, Bonnie A. WallaceAbstract:The Protein Circular Dichroism Data Bank (PCDDB) is a Public Repository that archives and freely distributes circular dichroism (CD) and synchrotron radiation CD (SRCD) spectral data and their associated experimental metadata. All entries undergo validation and curation procedures to ensure completeness, consistency and quality of the data included. A web-based interface enables users to browse and query sample types, sample conditions, experimental parameters and provides spectra in both graphical display format and as downloadable text files. The entries are linked, when appropriate, to primary sequence (UniProt) and structural (PDB) databases, as well as to secondary databases such as the Enzyme Commission functional classification database and the CATH fold classification database, as well as to literature citations. The PCDDB is available at: http://pcddb.cryst.bbk.ac.uk.
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The Protein Circular Dichroism Data Bank, A Web-Based Site for Access to Circular Dichroism Spectroscopic Data
Structure, 2010Co-Authors: Lee Whitmore, Robert W. Janes, Benjamin Woollett, Andrew J. Miles, Bonnie A. WallaceAbstract:Summary The Protein Circular Dichroism Data Bank (PCDDB) is a newly released resource for structural biology. It is a web-accessible (http://pcddb.cryst.bbk.ac.uk) data bank for circular dichroism (CD) and synchrotron radiation circular dichroism (SRCD) spectra and their associated experimental and secondary metadata, with links to protein sequence and structure data banks. It is designed to provide a Public Repository for CD spectroscopic data on macromolecules, to parallel the Protein Data Bank (PDB) for crystallographic, electron microscopic, and nuclear magnetic resonance spectroscopic data. Similarly to the PDB, it includes validation checking procedures to ensure good practice and the integrity of the deposited data. This paper reports on the first Public release of the PCDDB, which provides access to spectral data that comprise standard reference datasets.
Benjamin Woollett - One of the best experts on this subject based on the ideXlab platform.
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PCDDB: the Protein Circular Dichroism Data Bank, a Repository for circular dichroism spectral and metadata
Nucleic Acids Research, 2010Co-Authors: Lee Whitmore, Robert W. Janes, Benjamin Woollett, Andrew J. Miles, D. P. Klose, Bonnie A. WallaceAbstract:The Protein Circular Dichroism Data Bank (PCDDB) is a Public Repository that archives and freely distributes circular dichroism (CD) and synchrotron radiation CD (SRCD) spectral data and their associated experimental metadata. All entries undergo validation and curation procedures to ensure completeness, consistency and quality of the data included. A web-based interface enables users to browse and query sample types, sample conditions, experimental parameters and provides spectra in both graphical display format and as downloadable text files. The entries are linked, when appropriate, to primary sequence (UniProt) and structural (PDB) databases, as well as to secondary databases such as the Enzyme Commission functional classification database and the CATH fold classification database, as well as to literature citations. The PCDDB is available at: http://pcddb.cryst.bbk.ac.uk.
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The Protein Circular Dichroism Data Bank, A Web-Based Site for Access to Circular Dichroism Spectroscopic Data
Structure, 2010Co-Authors: Lee Whitmore, Robert W. Janes, Benjamin Woollett, Andrew J. Miles, Bonnie A. WallaceAbstract:Summary The Protein Circular Dichroism Data Bank (PCDDB) is a newly released resource for structural biology. It is a web-accessible (http://pcddb.cryst.bbk.ac.uk) data bank for circular dichroism (CD) and synchrotron radiation circular dichroism (SRCD) spectra and their associated experimental and secondary metadata, with links to protein sequence and structure data banks. It is designed to provide a Public Repository for CD spectroscopic data on macromolecules, to parallel the Protein Data Bank (PDB) for crystallographic, electron microscopic, and nuclear magnetic resonance spectroscopic data. Similarly to the PDB, it includes validation checking procedures to ensure good practice and the integrity of the deposited data. This paper reports on the first Public release of the PCDDB, which provides access to spectral data that comprise standard reference datasets.
