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Ribosomal RNA

The Experts below are selected from a list of 279 Experts worldwide ranked by ideXlab platform

Ribosomal RNA - Free Register to Access Experts & Abstracts

Rupe De Wachte - One of the best experts on this subject based on the ideXlab platform.

  • the european database on small subunit Ribosomal RNA
    Nucleic Acids Research, 2002
    Co-Authors: Ja Wuyts, Yves Van De Pee, Tina Winkelmans, Rupe De Wachte
    Abstract:

    The European database on SSU rRNA can be consulted via the World WideWeb at http://rRNA.uia.ac.be/ssu/ and compiles all complete or nearly complete small subunit Ribosomal RNA sequences. Sequences are provided in aligned format. The alignment takes into account the secondary structure information derived by comparative sequence analysis of thousands of sequences. Additional information such as literature references, taxonomy, secondary structure models and nucleotide variability maps, is also available.

  • the european large subunit Ribosomal RNA database
    Nucleic Acids Research, 2000
    Co-Authors: Ja Wuyts, Yves Van De Pee, Pete De Rijk, Tina Winkelmans, Rupe De Wachte
    Abstract:

    The European Large Subunit Ribosomal RNA Database compiles all complete or nearly complete large subunit Ribosomal RNA sequences available from public sequence databases. These are provided in aligned format and the secondary structure, as derived by comparative sequence analysis, is included. Additional information about the sequences such as literature references and taxonomic information is also included. The database is available from our WWW server at http://rRNA.uia.ac.be/lsu/.

  • the european small subunit Ribosomal RNA database
    Nucleic Acids Research, 2000
    Co-Authors: Yves Van De Pee, Ja Wuyts, Pete De Rijk, Tina Winkelmans, Rupe De Wachte
    Abstract:

    The European database of the Small Subunit (SSU) Ribosomal RNA is a curated database that strives to collect all information about the primary and secondary structure of completely or nearly-completely sequenced rRNAs. Furthermore, the database compiles additional information such as literature references and taxonomic status of the organism the sequence was derived from. The database can be consulted via the WWW at URL http://rRNA.uia.ac.be/ssu/ . Through the WWW, sequences can be easily selected either one by one, by taxonomic group, or by a combination of both, and can be retrieved in different sequence and alignment formats.

Yves Van De Pee - One of the best experts on this subject based on the ideXlab platform.

  • the european Ribosomal RNA database
    Nucleic Acids Research, 2004
    Co-Authors: Ja Wuyts, Guy Perriere, Yves Van De Pee
    Abstract:

    The European Ribosomal RNA database aims to compile all complete or nearly complete Ribosomal RNA sequences from both the small (SSU) and large (LSU) Ribosomal subunits. All sequences are available in aligned format. Sequence alignment is based on the secondary structure of the molecules, as determined by comparative sequence analysis. Additional information about the sequences, such as taxonomic classification of the organism from which they have been obtained, and literature references are also provided. In order to identify the closest relatives to newly determined sequences, BLAST searches can be performed, after which the best matching sequences are aligned and a phylogenetic tree is inferred. As of 2003, the European Ribosomal RNA database is maintained at Ghent University (Belgium). The database can be consulted at http://www.psb.ugent.be/rRNA/.

  • the european database on small subunit Ribosomal RNA
    Nucleic Acids Research, 2002
    Co-Authors: Ja Wuyts, Yves Van De Pee, Tina Winkelmans, Rupe De Wachte
    Abstract:

    The European database on SSU rRNA can be consulted via the World WideWeb at http://rRNA.uia.ac.be/ssu/ and compiles all complete or nearly complete small subunit Ribosomal RNA sequences. Sequences are provided in aligned format. The alignment takes into account the secondary structure information derived by comparative sequence analysis of thousands of sequences. Additional information such as literature references, taxonomy, secondary structure models and nucleotide variability maps, is also available.

  • the european large subunit Ribosomal RNA database
    Nucleic Acids Research, 2000
    Co-Authors: Ja Wuyts, Yves Van De Pee, Pete De Rijk, Tina Winkelmans, Rupe De Wachte
    Abstract:

    The European Large Subunit Ribosomal RNA Database compiles all complete or nearly complete large subunit Ribosomal RNA sequences available from public sequence databases. These are provided in aligned format and the secondary structure, as derived by comparative sequence analysis, is included. Additional information about the sequences such as literature references and taxonomic information is also included. The database is available from our WWW server at http://rRNA.uia.ac.be/lsu/.

  • the european small subunit Ribosomal RNA database
    Nucleic Acids Research, 2000
    Co-Authors: Yves Van De Pee, Ja Wuyts, Pete De Rijk, Tina Winkelmans, Rupe De Wachte
    Abstract:

    The European database of the Small Subunit (SSU) Ribosomal RNA is a curated database that strives to collect all information about the primary and secondary structure of completely or nearly-completely sequenced rRNAs. Furthermore, the database compiles additional information such as literature references and taxonomic status of the organism the sequence was derived from. The database can be consulted via the WWW at URL http://rRNA.uia.ac.be/ssu/ . Through the WWW, sequences can be easily selected either one by one, by taxonomic group, or by a combination of both, and can be retrieved in different sequence and alignment formats.

Ja Wuyts - One of the best experts on this subject based on the ideXlab platform.

  • the european Ribosomal RNA database
    Nucleic Acids Research, 2004
    Co-Authors: Ja Wuyts, Guy Perriere, Yves Van De Pee
    Abstract:

    The European Ribosomal RNA database aims to compile all complete or nearly complete Ribosomal RNA sequences from both the small (SSU) and large (LSU) Ribosomal subunits. All sequences are available in aligned format. Sequence alignment is based on the secondary structure of the molecules, as determined by comparative sequence analysis. Additional information about the sequences, such as taxonomic classification of the organism from which they have been obtained, and literature references are also provided. In order to identify the closest relatives to newly determined sequences, BLAST searches can be performed, after which the best matching sequences are aligned and a phylogenetic tree is inferred. As of 2003, the European Ribosomal RNA database is maintained at Ghent University (Belgium). The database can be consulted at http://www.psb.ugent.be/rRNA/.

  • the european database on small subunit Ribosomal RNA
    Nucleic Acids Research, 2002
    Co-Authors: Ja Wuyts, Yves Van De Pee, Tina Winkelmans, Rupe De Wachte
    Abstract:

    The European database on SSU rRNA can be consulted via the World WideWeb at http://rRNA.uia.ac.be/ssu/ and compiles all complete or nearly complete small subunit Ribosomal RNA sequences. Sequences are provided in aligned format. The alignment takes into account the secondary structure information derived by comparative sequence analysis of thousands of sequences. Additional information such as literature references, taxonomy, secondary structure models and nucleotide variability maps, is also available.

  • the european large subunit Ribosomal RNA database
    Nucleic Acids Research, 2000
    Co-Authors: Ja Wuyts, Yves Van De Pee, Pete De Rijk, Tina Winkelmans, Rupe De Wachte
    Abstract:

    The European Large Subunit Ribosomal RNA Database compiles all complete or nearly complete large subunit Ribosomal RNA sequences available from public sequence databases. These are provided in aligned format and the secondary structure, as derived by comparative sequence analysis, is included. Additional information about the sequences such as literature references and taxonomic information is also included. The database is available from our WWW server at http://rRNA.uia.ac.be/lsu/.

  • the european small subunit Ribosomal RNA database
    Nucleic Acids Research, 2000
    Co-Authors: Yves Van De Pee, Ja Wuyts, Pete De Rijk, Tina Winkelmans, Rupe De Wachte
    Abstract:

    The European database of the Small Subunit (SSU) Ribosomal RNA is a curated database that strives to collect all information about the primary and secondary structure of completely or nearly-completely sequenced rRNAs. Furthermore, the database compiles additional information such as literature references and taxonomic status of the organism the sequence was derived from. The database can be consulted via the WWW at URL http://rRNA.uia.ac.be/ssu/ . Through the WWW, sequences can be easily selected either one by one, by taxonomic group, or by a combination of both, and can be retrieved in different sequence and alignment formats.

Tina Winkelmans - One of the best experts on this subject based on the ideXlab platform.

  • the european database on small subunit Ribosomal RNA
    Nucleic Acids Research, 2002
    Co-Authors: Ja Wuyts, Yves Van De Pee, Tina Winkelmans, Rupe De Wachte
    Abstract:

    The European database on SSU rRNA can be consulted via the World WideWeb at http://rRNA.uia.ac.be/ssu/ and compiles all complete or nearly complete small subunit Ribosomal RNA sequences. Sequences are provided in aligned format. The alignment takes into account the secondary structure information derived by comparative sequence analysis of thousands of sequences. Additional information such as literature references, taxonomy, secondary structure models and nucleotide variability maps, is also available.

  • the european large subunit Ribosomal RNA database
    Nucleic Acids Research, 2000
    Co-Authors: Ja Wuyts, Yves Van De Pee, Pete De Rijk, Tina Winkelmans, Rupe De Wachte
    Abstract:

    The European Large Subunit Ribosomal RNA Database compiles all complete or nearly complete large subunit Ribosomal RNA sequences available from public sequence databases. These are provided in aligned format and the secondary structure, as derived by comparative sequence analysis, is included. Additional information about the sequences such as literature references and taxonomic information is also included. The database is available from our WWW server at http://rRNA.uia.ac.be/lsu/.

  • the european small subunit Ribosomal RNA database
    Nucleic Acids Research, 2000
    Co-Authors: Yves Van De Pee, Ja Wuyts, Pete De Rijk, Tina Winkelmans, Rupe De Wachte
    Abstract:

    The European database of the Small Subunit (SSU) Ribosomal RNA is a curated database that strives to collect all information about the primary and secondary structure of completely or nearly-completely sequenced rRNAs. Furthermore, the database compiles additional information such as literature references and taxonomic status of the organism the sequence was derived from. The database can be consulted via the WWW at URL http://rRNA.uia.ac.be/ssu/ . Through the WWW, sequences can be easily selected either one by one, by taxonomic group, or by a combination of both, and can be retrieved in different sequence and alignment formats.

Pete De Rijk - One of the best experts on this subject based on the ideXlab platform.

  • the european large subunit Ribosomal RNA database
    Nucleic Acids Research, 2000
    Co-Authors: Ja Wuyts, Yves Van De Pee, Pete De Rijk, Tina Winkelmans, Rupe De Wachte
    Abstract:

    The European Large Subunit Ribosomal RNA Database compiles all complete or nearly complete large subunit Ribosomal RNA sequences available from public sequence databases. These are provided in aligned format and the secondary structure, as derived by comparative sequence analysis, is included. Additional information about the sequences such as literature references and taxonomic information is also included. The database is available from our WWW server at http://rRNA.uia.ac.be/lsu/.

  • the european small subunit Ribosomal RNA database
    Nucleic Acids Research, 2000
    Co-Authors: Yves Van De Pee, Ja Wuyts, Pete De Rijk, Tina Winkelmans, Rupe De Wachte
    Abstract:

    The European database of the Small Subunit (SSU) Ribosomal RNA is a curated database that strives to collect all information about the primary and secondary structure of completely or nearly-completely sequenced rRNAs. Furthermore, the database compiles additional information such as literature references and taxonomic status of the organism the sequence was derived from. The database can be consulted via the WWW at URL http://rRNA.uia.ac.be/ssu/ . Through the WWW, sequences can be easily selected either one by one, by taxonomic group, or by a combination of both, and can be retrieved in different sequence and alignment formats.