Aeromonadaceae

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Célia M. Manaia - One of the best experts on this subject based on the ideXlab platform.

  • Neighbor urban wastewater treatment plants display distinct profiles of bacterial community and antibiotic resistance genes.
    Environmental science and pollution research international, 2019
    Co-Authors: Telma Fernandes, Ivone Vaz-moreira, Célia M. Manaia
    Abstract:

    Urban wastewater treatment plants (UWTPs) are among the major recipients of antibiotic-resistant bacteria (ARB), antibiotic resistance genes (ARGs), and antibiotic residues in urban environments. Although during treatment, bacteria of human and animal origin are removed, some are able to survive, persisting in the final effluent. The occurrence of these bacteria, especially those harboring ARGs, may have a direct impact on the quality of the treated wastewater that is returned to the environment. In this study, we aimed to assess if the final effluent bacterial communities of three UWTPs (PT1, PT2, and PT3) located next to each other were distinct and if such differences were related with the antibiotic resistance profiles. It was observed that the bacterial community (16S rRNA gene Illumina sequencing) and load of selected ARGs of final effluent differed among the three UWTPs, irrespective of sampling time. Members of the families Aeromonadaceae, Campylobacteraceae, Veillonellaceae, [Weeksellaceae], and Porphyromonadaceae were observed to be positively correlated with some ARGs (blaCTX–M, blaOXA-A, blaSHV) and intI1 (p 

Hope Tice - One of the best experts on this subject based on the ideXlab platform.

  • Complete genome sequence of Tolumonas auensis type strain (TA 4T)
    Standards in genomic sciences, 2011
    Co-Authors: Olga Chertkov, Alex Copeland, Susan Lucas, Alla Lapidus, Kerrie W. Berry, John C. Detter, Nancy Hammon, Eileen Dalin, Tijana Glavina Del Rio, Hope Tice
    Abstract:

    Tolumonas auensis Fischer-Romero et al. 1996 is currently the only validly named species of the genus Tolumonas in the family Aeromonadaceae. The strain is of interest because of its ability to produce toluene from phenylalanine and other phenyl precursors, as well as phenol from tyrosine. This is of interest because toluene is normally considered to be a tracer of anthropogenic pollution in lakes, but T. auensis represents a biogenic source of toluene. Other than Aeromonas hydrophila subsp. hydrophila, T. auensis strain TA 4T is the only other member in the family Aeromonadaceae with a completely sequenced type-strain genome. The 3,471,292 bp chromosome with a total of 3,288 protein-coding and 116 RNA genes was sequenced as part of the DOE Joint Genome Institute Program JBEI 2008.

  • Complete genome sequence of Tolumonas auensis type strain (TA 4^T)
    Standards in Genomic Sciences, 2011
    Co-Authors: Olga Chertkov, Alex Copeland, Susan Lucas, Alla Lapidus, Kerrie W. Berry, John C. Detter, Tijana Glavina Del Rio, Nancy Hammon, Eileen Dalin, Hope Tice
    Abstract:

    Tolumonas auensis Fischer-Romero et al. 1996 is currently the only validly named species of the genus Tolumonas in the family Aeromonadaceae . The strain is of interest because of its ability to produce toluene from phenylalanine and other phenyl precursors, as well as phenol from tyrosine. This is of interest because toluene is normally considered to be a tracer of anthropogenic pollution in lakes, but T. auensis represents a biogenic source of toluene. Other than Aeromonas hydrophila subsp. hydrophila , T. auensis strain TA 4^T is the only other member in the family Aeromonadaceae with a completely sequenced type-strain genome. The 3,471,292 bp chromosome with a total of 3,288 protein-coding and 116 RNA genes was sequenced as part of the DOE Joint Genome Institute Program JBEI 2008.

Telma Fernandes - One of the best experts on this subject based on the ideXlab platform.

  • Neighbor urban wastewater treatment plants display distinct profiles of bacterial community and antibiotic resistance genes.
    Environmental science and pollution research international, 2019
    Co-Authors: Telma Fernandes, Ivone Vaz-moreira, Célia M. Manaia
    Abstract:

    Urban wastewater treatment plants (UWTPs) are among the major recipients of antibiotic-resistant bacteria (ARB), antibiotic resistance genes (ARGs), and antibiotic residues in urban environments. Although during treatment, bacteria of human and animal origin are removed, some are able to survive, persisting in the final effluent. The occurrence of these bacteria, especially those harboring ARGs, may have a direct impact on the quality of the treated wastewater that is returned to the environment. In this study, we aimed to assess if the final effluent bacterial communities of three UWTPs (PT1, PT2, and PT3) located next to each other were distinct and if such differences were related with the antibiotic resistance profiles. It was observed that the bacterial community (16S rRNA gene Illumina sequencing) and load of selected ARGs of final effluent differed among the three UWTPs, irrespective of sampling time. Members of the families Aeromonadaceae, Campylobacteraceae, Veillonellaceae, [Weeksellaceae], and Porphyromonadaceae were observed to be positively correlated with some ARGs (blaCTX–M, blaOXA-A, blaSHV) and intI1 (p 

Olga Chertkov - One of the best experts on this subject based on the ideXlab platform.

  • Complete genome sequence of Tolumonas auensis type strain (TA 4T)
    Standards in genomic sciences, 2011
    Co-Authors: Olga Chertkov, Alex Copeland, Susan Lucas, Alla Lapidus, Kerrie W. Berry, John C. Detter, Nancy Hammon, Eileen Dalin, Tijana Glavina Del Rio, Hope Tice
    Abstract:

    Tolumonas auensis Fischer-Romero et al. 1996 is currently the only validly named species of the genus Tolumonas in the family Aeromonadaceae. The strain is of interest because of its ability to produce toluene from phenylalanine and other phenyl precursors, as well as phenol from tyrosine. This is of interest because toluene is normally considered to be a tracer of anthropogenic pollution in lakes, but T. auensis represents a biogenic source of toluene. Other than Aeromonas hydrophila subsp. hydrophila, T. auensis strain TA 4T is the only other member in the family Aeromonadaceae with a completely sequenced type-strain genome. The 3,471,292 bp chromosome with a total of 3,288 protein-coding and 116 RNA genes was sequenced as part of the DOE Joint Genome Institute Program JBEI 2008.

  • Complete genome sequence of Tolumonas auensis type strain (TA 4^T)
    Standards in Genomic Sciences, 2011
    Co-Authors: Olga Chertkov, Alex Copeland, Susan Lucas, Alla Lapidus, Kerrie W. Berry, John C. Detter, Tijana Glavina Del Rio, Nancy Hammon, Eileen Dalin, Hope Tice
    Abstract:

    Tolumonas auensis Fischer-Romero et al. 1996 is currently the only validly named species of the genus Tolumonas in the family Aeromonadaceae . The strain is of interest because of its ability to produce toluene from phenylalanine and other phenyl precursors, as well as phenol from tyrosine. This is of interest because toluene is normally considered to be a tracer of anthropogenic pollution in lakes, but T. auensis represents a biogenic source of toluene. Other than Aeromonas hydrophila subsp. hydrophila , T. auensis strain TA 4^T is the only other member in the family Aeromonadaceae with a completely sequenced type-strain genome. The 3,471,292 bp chromosome with a total of 3,288 protein-coding and 116 RNA genes was sequenced as part of the DOE Joint Genome Institute Program JBEI 2008.

Se Chang Park - One of the best experts on this subject based on the ideXlab platform.

  • complete genome sequence of bacteriophage phias7 a t7 like virus that infects aeromonas salmonicida subsp salmonicida
    Journal of Virology, 2012
    Co-Authors: Casiano H Choresca, Sang Phil Shin, Chulhong Oh, Dohyung Kang, Se Chang Park
    Abstract:

    To date, a number of Myoviridae bacteriophages that infect Aeromonadaceae have been identified and characterized. However, the genome sequences of Aeromonas phages that not belong to the Myoviridae have not been investigated yet. Herein, we report the complete genome sequence of Aeromonas phage phiAS7, which belongs to the Podoviridae and infects Aeromonas salmonicida subsp. salmonicida.

  • complete genomic sequence of a t4 like bacteriophage phias4 infecting aeromonas salmonicida subsp salmonicida
    Archives of Virology, 2012
    Co-Authors: Younho Choi, Casiano H Choresca, Sang Phil Shin, Se Chang Park
    Abstract:

    A newly identified virulent phage (named phiAS4) infecting Aeromonas salmonicida subsp. salmonicida was isolated from river water in Korea. Morphological analysis of phiAS4 by transmission electron microscopy revealed that it belonged to the family Myoviridae. The genome of phiAS4 comprised a linear double-stranded DNA of 163,875 bp with a G + C content of 41.3%, and genomic analysis revealed 271 putative ORFs, 67 putative promoters, 25 putative terminator regions, and 16 tRNA-encoding genes. Most of the ORFs of phiAS4 showed a high degree of similarity to those of Aeromonas phage 25, which belongs to the T4-like group. Moreover, the comparison of the genome of phiAS4 with those of its relatives demonstrated that phage phiAS4 is closely related to members of the T4-like group and can be classified as a new member of the T4-like phages infecting bacteria of the family Aeromonadaceae.