Arundinaria

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Hugh D. Wilson - One of the best experts on this subject based on the ideXlab platform.

Achyut Aryal - One of the best experts on this subject based on the ideXlab platform.

  • diet and macronutrient niche of asiatic black bear ursus thibetanus in two regions of nepal during summer and autumn
    Ecology and Evolution, 2019
    Co-Authors: Saroj Panthi, Achyut Aryal, Sean C. P. Coogan
    Abstract:

    Relatively little is known about the nutritional ecology of omnivorous Asiatic black bears (Ursus thibetanus) in Nepal. We characterized the diet of black bears in two seasons (June-July, "summer"; and October-November "autumn") and two study areas (Dhorpatan Hunting Reserve [DHR]; and Kailash Sacred Landscape [KSL]). We then conducted nutritional analysis of species consumed by black bears in each study area, in combination with nutritional estimates from the literature, to estimate the proportions of macronutrients (i.e., protein [P], lipid [L], and carbohydrate [C]) in the seasonal bear foods and diets, as well as their macronutrient niche breadth. We found that bamboo (Arundinaria spp.) had the highest relative frequency in both study areas and seasons. Ants and termites were found in DHR diets, but not KSL diets. One anthropogenic crop was found in DHR summer diets (Zea mays) and two were found in KSL summer diets (Z. mays; and Kodo millet [Paspalum scrobiculatum]). Other than insects, no animal prey was found in either diet. The proportions of macronutrients in diets (i.e., realized macronutrient niches) were relatively high in carbohydrate for both study areas and seasons: DHRsummer 24.1P:8.7L:67.2C; KSLsummer 16.7P:8.2L:75.1C; DHRautumn 21.1P:10.5L:68.4C; KSHautumn 19.0P:11.0L:70.0C. Macronutrient niche breadth was 3.1 × greater in the DHR than KSL during summer, and 4.0 × greater in the autumn, primarily due to the higher proportion of lipid in ants and termites relative to plant foods. Within-study area differences in niche breadth were greater during summer than autumn; in the KSH the macronutrient breadth was 1.4 × greater in summer, while in the DHR it was 1.1 × greater in summer. Similarity in dietary macronutrient proportions despite differences in foods consumed and niche breadth are suggestive of foraging to reach a preferred macronutrient balance.

  • Diet and nutrient balance of red panda in Nepal
    The Science of Nature, 2015
    Co-Authors: Saroj Panthi, Sean C. P. Coogan, Achyut Aryal, David Raubenheimer
    Abstract:

    We identified the winter plant species consumed by red panda in the Dhorpatan Hunting Reserve of eastern Nepal and compared this to the early-summer diet which was determined previously by Panthi et al. ( 2012 ). In addition, we estimated the proximate nutritional content of the leaves identified in red panda diet for both seasons, and we used nutritional geometry to explore macronutrient balance of leaves from the two different sampling periods. We identified six different plants in winter scats, which were the same as found in the previously determined early-summer diet. Arundinaria spp. bamboos were the main species found (82.1 % relative frequency), followed by Acer spp. (6.3 %), Betula utilis (4.6 %), Quercus semicarpifolia (3.7 %), Berberis spp. (1.3 %), and lichens (1.0 %), leaving 2.0 % unidentified. Geometric analysis suggested that the macronutrient balance of seasonal diets were similar in nutrient balance to the most frequently consumed Arundinaria spp. Differences in macronutrient balance may indicate seasonal nutrient preferences, such as increased carbohydrate intake in winter for thermogenesis, and increased protein and lipid intake in early summer to support reproduction and lactation; however, these differences may also indicate differences in resource availability. Habitat conserved for red panda in the region should include sufficient Arundinaria spp. as well as lesser consumed plants which may serve as complimentary foods.

  • summer diet and distribution of the red panda ailurus fulgens fulgens in dhorpatan hunting reserve nepal
    Zoological Studies, 2012
    Co-Authors: Saroj Panthi, Achyut Aryal, David Raubenheimer, Jennie Lord, Bikash Adhikari
    Abstract:

    The red panda (Ailurus fulgens fulgens) is distributed throughout the Himalayas and is found in both protected and unprotected areas of Nepal. Loss and fragmentation of habitat threaten red panda populations throughout its range, and as a consequence, it is listed as vulnerable on the IUCN Red List of Threatened Species. Despite this pressing situation, data on the ecology of the red panda in western Nepal are lacking. Our aim in the current study was to determine the distribution, associated habitats, and summer diet of the red panda in Dhorpatan Hunting Reserve (DHR), Nepal. Evidence of red pandas was found in all 6 blocks (except Dogadi block) of the reserve, spanning an area of 345.8 km2, between elevations of 2800 m and 4000 m and predominantly (＞ 75%) in forests comprising plant communities dominated by Abies spectabilis, Acer caesium, Tsuga domusa, and Betula utilis, with ground cover of Arundinaria spp. The dominant plant found in scat of the red panda was Arundinaria spp. (81.7%), with Acer spp., B. utilis, and lichen also frequently present. Livestock grazing and human activities were significantly higher in habitats where signs of pandas were recorded than in areas where they were absent. This habitat overlap between the red panda and livestock potentially poses a major threat to the panda’s survival in the DHR, a fact that should be taken into account in devising management strategies for this threatened species.

Lynn G Clark - One of the best experts on this subject based on the ideXlab platform.

  • phylogeny of the temperate bamboos poaceae bambusoideae bambuseae with an emphasis on Arundinaria and allies
    Systematic Botany, 2010
    Co-Authors: Jimmy K Triplett, Lynn G Clark
    Abstract:

    The temperate bamboos are a morphologically diverse grass lineage with a complex and problematic taxonomy. We present the first robust multilocus chloroplast phylogeny of the temperate bamboos, assess relationships among key genera with an emphasis on Arundinaria and its allies, and highlight the potential role of hybridization and reticulate evolution in this group. Utilizing a total of twelve plastid DNA regions (1 gene, 10 intergenic spacers, and 1 intron), the temperate clade was resolved to include six major lineages: Bergbamboes, the African alpine bamboos, Chimonocalamus, the Shibataea clade, the Phyllostachys clade, and the Arundinaria clade. Internal resolution varied among these six, in part reflecting sampling density and in part due to apparent evolutionary rate heterogeneity. The recovered phylogeny is largely incongruent with morphological classifications, rendering subtribes and many genera paraphyletic or polyphyletic. Some associations are consistent with existing hypotheses of intergeneric hybridization, while others may indicate convergent evolution, lineage sorting, or previously unsuspected cases of hybridization. Several robust lineages were identified within the Arundinaria clade, including the Medake subclade (Pleioblastus s. s. and allies), Sasa s. s., and the Sinicae subclade (comprising a subset of Chinese taxa currently classified in Acidosasa, Indosasa, Pleioblastus sect. Amari, and Pseudosasa subg. Sinicae). Our analyses also recovered a monophyletic Arundinaria s. s. in North America, and revealed substantial divergence between A. gigantea and A. tecta.

  • phylogenetic relationships and natural hybridization among the north american woody bamboos poaceae bambusoideae Arundinaria
    American Journal of Botany, 2010
    Co-Authors: Jimmy K Triplett, Kimberly A Oltrogge, Lynn G Clark
    Abstract:

    In spite of the ecological and economic importance of temperate bamboos, relatively little is known about their population biology or evolutionary history. Recently, hybridization has emerged as a potential source of diversity in this group, as well as an underlying cause of taxonomic problems. As part of a broader phylogenetic study of the temperate bamboos, we report the results of an analysis of the North American Arundinaria gigantea species complex, including estimates of genetic variation and molecular evidence of natural hybridization among A. gigantea , A. tecta , and A. appalachiana . The study involved a comparative analysis of amplifi ed fragment length polymorphisms (AFLPs) and chloroplast DNA sequences representing diversity within and among all three species plus individuals with intermediate or unusual morphological characteristics (putative hybrids). Molecular results support the recognition of three species previously defi ned on the basis of morphology, anatomy, and ecology, with most of the molecular variance accounted for by among-species variation. Molecular evidence also demonstrates that A. tecta and A. appalachiana are sister species, forming a clade that is signifi cantly divergent from A. gigantea . The role of hybridization in the phylogenetic history of Arundinaria is discussed along with implications for the evolution and taxonomy of the temperate woody bamboos.

Jimmy K Triplett - One of the best experts on this subject based on the ideXlab platform.

  • phylogeny of the temperate bamboos poaceae bambusoideae bambuseae with an emphasis on Arundinaria and allies
    Systematic Botany, 2010
    Co-Authors: Jimmy K Triplett, Lynn G Clark
    Abstract:

    The temperate bamboos are a morphologically diverse grass lineage with a complex and problematic taxonomy. We present the first robust multilocus chloroplast phylogeny of the temperate bamboos, assess relationships among key genera with an emphasis on Arundinaria and its allies, and highlight the potential role of hybridization and reticulate evolution in this group. Utilizing a total of twelve plastid DNA regions (1 gene, 10 intergenic spacers, and 1 intron), the temperate clade was resolved to include six major lineages: Bergbamboes, the African alpine bamboos, Chimonocalamus, the Shibataea clade, the Phyllostachys clade, and the Arundinaria clade. Internal resolution varied among these six, in part reflecting sampling density and in part due to apparent evolutionary rate heterogeneity. The recovered phylogeny is largely incongruent with morphological classifications, rendering subtribes and many genera paraphyletic or polyphyletic. Some associations are consistent with existing hypotheses of intergeneric hybridization, while others may indicate convergent evolution, lineage sorting, or previously unsuspected cases of hybridization. Several robust lineages were identified within the Arundinaria clade, including the Medake subclade (Pleioblastus s. s. and allies), Sasa s. s., and the Sinicae subclade (comprising a subset of Chinese taxa currently classified in Acidosasa, Indosasa, Pleioblastus sect. Amari, and Pseudosasa subg. Sinicae). Our analyses also recovered a monophyletic Arundinaria s. s. in North America, and revealed substantial divergence between A. gigantea and A. tecta.

  • large multi locus plastid phylogeny of the tribe arundinarieae poaceae bambusoideae reveals ten major lineages and low rate of molecular divergence
    Molecular Phylogenetics and Evolution, 2010
    Co-Authors: Chunxia Zeng, Jimmy K Triplett, Yuxiao Zhang, Junbo Yang
    Abstract:

    The temperate bamboos (tribe Arundinarieae) are notorious for being taxonomically extremely difficult. China contains some of the world's greatest diversity of the tribe Arundinarieae, with most genera and species endemic. Previous investigation into phylogenetic relationships of the temperate bamboos revealed several major clades, but emphasis on the species-level relationships among taxa in North America and Japan. To further elucidate relationships among the temperate bamboos, a very broad sampling of Chinese representatives was examined. We produced 9463 bp of sequences from eight non-coding chloroplast regions for 146 species in 26 genera and 5 outgroups. The loci sequenced were atpI/H, psaA-ORF170, rpl32-trnL, rpoB-trnC, rps16-trnQ, trnD/T, trnS/G, and trnT/L. Phylogenetic analyses using maximum parsimony and Bayesian inference supported the monophyly of Arundinarieae. The two major subtribes, Arundinariinae and Shibataeinae, defined on the basis of different synflorescence types, were indicated to be polyphyletic. Most genera in this tribe were confirmed to be paraphyletic or polyphyletic. The cladograms suggest that Arundinarieae is divided into ten major lineages. In addition to six lineages suggested in a previous molecular study (Bergbamboes, the African alpine bamboos, Chimonocalamus, the Shibataea clade, the Phyllostachys clade, and the Arundinaria clade), four additional lineages were recovered in our results, each represented by a single species: Gaoligongshania megalothyrsa, Indocalamus sinicus, Indocalamus wilsonii, Thamnocalamus spathiflorus. Our analyses also indicate that (1) even more than 9000 bp of fast-evolving plastid sequence data cannot resolve the inter- and infra-relationships among and within the ten lineages of the tribe Arundinarieae; (2) an extensive sampling is indispensable for phylogeny reconstruction in this tribe, especially given that many genera appear to be paraphyletic or polyphyletic. Perhaps the ideal way to further illuminate relationships among the temperate bamboos is to sample multiple nuclear loci or whole chloroplast sequences in order to obtain sufficient variation.

  • phylogenetic relationships and natural hybridization among the north american woody bamboos poaceae bambusoideae Arundinaria
    American Journal of Botany, 2010
    Co-Authors: Jimmy K Triplett, Kimberly A Oltrogge, Lynn G Clark
    Abstract:

    In spite of the ecological and economic importance of temperate bamboos, relatively little is known about their population biology or evolutionary history. Recently, hybridization has emerged as a potential source of diversity in this group, as well as an underlying cause of taxonomic problems. As part of a broader phylogenetic study of the temperate bamboos, we report the results of an analysis of the North American Arundinaria gigantea species complex, including estimates of genetic variation and molecular evidence of natural hybridization among A. gigantea , A. tecta , and A. appalachiana . The study involved a comparative analysis of amplifi ed fragment length polymorphisms (AFLPs) and chloroplast DNA sequences representing diversity within and among all three species plus individuals with intermediate or unusual morphological characteristics (putative hybrids). Molecular results support the recognition of three species previously defi ned on the basis of morphology, anatomy, and ecology, with most of the molecular variance accounted for by among-species variation. Molecular evidence also demonstrates that A. tecta and A. appalachiana are sister species, forming a clade that is signifi cantly divergent from A. gigantea . The role of hybridization in the phylogenetic history of Arundinaria is discussed along with implications for the evolution and taxonomy of the temperate woody bamboos.

Sean C. P. Coogan - One of the best experts on this subject based on the ideXlab platform.

  • diet and macronutrient niche of asiatic black bear ursus thibetanus in two regions of nepal during summer and autumn
    Ecology and Evolution, 2019
    Co-Authors: Saroj Panthi, Achyut Aryal, Sean C. P. Coogan
    Abstract:

    Relatively little is known about the nutritional ecology of omnivorous Asiatic black bears (Ursus thibetanus) in Nepal. We characterized the diet of black bears in two seasons (June-July, "summer"; and October-November "autumn") and two study areas (Dhorpatan Hunting Reserve [DHR]; and Kailash Sacred Landscape [KSL]). We then conducted nutritional analysis of species consumed by black bears in each study area, in combination with nutritional estimates from the literature, to estimate the proportions of macronutrients (i.e., protein [P], lipid [L], and carbohydrate [C]) in the seasonal bear foods and diets, as well as their macronutrient niche breadth. We found that bamboo (Arundinaria spp.) had the highest relative frequency in both study areas and seasons. Ants and termites were found in DHR diets, but not KSL diets. One anthropogenic crop was found in DHR summer diets (Zea mays) and two were found in KSL summer diets (Z. mays; and Kodo millet [Paspalum scrobiculatum]). Other than insects, no animal prey was found in either diet. The proportions of macronutrients in diets (i.e., realized macronutrient niches) were relatively high in carbohydrate for both study areas and seasons: DHRsummer 24.1P:8.7L:67.2C; KSLsummer 16.7P:8.2L:75.1C; DHRautumn 21.1P:10.5L:68.4C; KSHautumn 19.0P:11.0L:70.0C. Macronutrient niche breadth was 3.1 × greater in the DHR than KSL during summer, and 4.0 × greater in the autumn, primarily due to the higher proportion of lipid in ants and termites relative to plant foods. Within-study area differences in niche breadth were greater during summer than autumn; in the KSH the macronutrient breadth was 1.4 × greater in summer, while in the DHR it was 1.1 × greater in summer. Similarity in dietary macronutrient proportions despite differences in foods consumed and niche breadth are suggestive of foraging to reach a preferred macronutrient balance.

  • Diet and nutrient balance of red panda in Nepal
    The Science of Nature, 2015
    Co-Authors: Saroj Panthi, Sean C. P. Coogan, Achyut Aryal, David Raubenheimer
    Abstract:

    We identified the winter plant species consumed by red panda in the Dhorpatan Hunting Reserve of eastern Nepal and compared this to the early-summer diet which was determined previously by Panthi et al. ( 2012 ). In addition, we estimated the proximate nutritional content of the leaves identified in red panda diet for both seasons, and we used nutritional geometry to explore macronutrient balance of leaves from the two different sampling periods. We identified six different plants in winter scats, which were the same as found in the previously determined early-summer diet. Arundinaria spp. bamboos were the main species found (82.1 % relative frequency), followed by Acer spp. (6.3 %), Betula utilis (4.6 %), Quercus semicarpifolia (3.7 %), Berberis spp. (1.3 %), and lichens (1.0 %), leaving 2.0 % unidentified. Geometric analysis suggested that the macronutrient balance of seasonal diets were similar in nutrient balance to the most frequently consumed Arundinaria spp. Differences in macronutrient balance may indicate seasonal nutrient preferences, such as increased carbohydrate intake in winter for thermogenesis, and increased protein and lipid intake in early summer to support reproduction and lactation; however, these differences may also indicate differences in resource availability. Habitat conserved for red panda in the region should include sufficient Arundinaria spp. as well as lesser consumed plants which may serve as complimentary foods.

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