The Experts below are selected from a list of 483459 Experts worldwide ranked by ideXlab platform
Jianxin Wang - One of the best experts on this subject based on the ideXlab platform.
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CSA: a web service for the Complete Process of ChIP-Seq analysis.
BMC Bioinformatics, 2019Co-Authors: Li Tang, Yi Pan, Jianxin WangAbstract:Chromatin immunoprecipitation sequencing (ChIP-seq) is a technology that combines chromatin immunoprecipitation (ChIP) with next generation of sequencing technology (NGS) to analyze protein interactions with DNA. At present, most ChIP-seq analysis tools adopt the command line, which lacks user-friendly interfaces. Although some web services with graphical interfaces have been developed for ChIP-seq analysis, these sites cannot provide a comprehensive analysis of ChIP-seq from raw data to downstream analysis. In this study, we develop a web service for the whole Process of ChIP-Seq Analysis (CSA), which covers mapping, quality control, peak calling, and downstream analysis. In addition, CSA provides a customization function for users to define their own workflows. And the visualization of mapping, peak calling, motif finding, and pathway analysis results are also provided in CSA. For the different types of ChIP-seq datasets, CSA can provide the corresponding tool to perform the analysis. Moreover, CSA can detect differences in ChIP signals between ChIP samples and controls to identify absolute binding sites. The two case studies demonstrate the effectiveness of CSA, which can Complete the whole procedure of ChIP-seq analysis. CSA provides a web interface for users, and implements the visualization of every analysis step. The website of CSA is available at http://CompuBio.csu.edu.cn
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CSA: a web service for the Complete Process of ChIP-Seq analysis
BMC Bioinformatics, 2019Co-Authors: Li Tang, Yi Pan, Jianxin WangAbstract:Abstract Background Chromatin immunoprecipitation sequencing (ChIP-seq) is a technology that combines chromatin immunoprecipitation (ChIP) with next generation of sequencing technology (NGS) to analyze protein interactions with DNA. At present, most ChIP-seq analysis tools adopt the command line, which lacks user-friendly interfaces. Although some web services with graphical interfaces have been developed for ChIP-seq analysis, these sites cannot provide a comprehensive analysis of ChIP-seq from raw data to downstream analysis. Results In this study, we develop a web service for the whole Process of ChIP-Seq Analysis (CSA), which covers mapping, quality control, peak calling, and downstream analysis. In addition, CSA provides a customization function for users to define their own workflows. And the visualization of mapping, peak calling, motif finding, and pathway analysis results are also provided in CSA. For the different types of ChIP-seq datasets, CSA can provide the corresponding tool to perform the analysis. Moreover, CSA can detect differences in ChIP signals between ChIP samples and controls to identify absolute binding sites. Conclusions The two case studies demonstrate the effectiveness of CSA, which can Complete the whole procedure of ChIP-seq analysis. CSA provides a web interface for users, and implements the visualization of every analysis step. The website of CSA is available at http://CompuBio.csu.edu.cn
Jette Kristensen - One of the best experts on this subject based on the ideXlab platform.
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a Complete Process for production of flexible large area polymer solar cells entirely using screen printing first public demonstration
Solar Energy Materials and Solar Cells, 2009Co-Authors: Frederik C Krebs, Mikkel Jorgensen, Kion Norrman, Ole Hagemann, Jan Alstrup, Torben Damgaard Nielsen, Jan Fyenbo, Kaj Larsen, Jette KristensenAbstract:Abstract A Complete polymer solar cell module prepared in the ambient atmosphere under industrial conditions is presented. The versatility of the polymer solar cell technology is demonstrated through the use of abstract forms for the active area, a flexible substrate, Processing entirely from solution, Complete Processing in air using commonly available screen printing, and finally, simple mechanical encapsulation using a flexible packaging material and electrical contacting post-production using crimped contacts. We detail the production of more than 2000 modules in one production run and show that the production technique is scalable and well suited for direct transfer to the printing industry employing existing production equipment. The production speed and cost analysis for the individual modules from this batch is discussed and a forecast for the high volume cost based on this method is given. Further, the points where significant cost reductions can be achieved are identified. The use of the solar cell as the power supply for a small radio and other small electronic circuits is demonstrated. Lastly, the operational stability under ambient conditions in the dark and under illumination is discussed.
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A Complete Process for production of flexible large area polymer solar cells entirely using screen printing—First public demonstration
Solar Energy Materials and Solar Cells, 2009Co-Authors: Frederik C Krebs, Mikkel Jorgensen, Kion Norrman, Ole Hagemann, Jan Alstrup, Torben Damgaard Nielsen, Jan Fyenbo, Kaj Larsen, Jette KristensenAbstract:Abstract A Complete polymer solar cell module prepared in the ambient atmosphere under industrial conditions is presented. The versatility of the polymer solar cell technology is demonstrated through the use of abstract forms for the active area, a flexible substrate, Processing entirely from solution, Complete Processing in air using commonly available screen printing, and finally, simple mechanical encapsulation using a flexible packaging material and electrical contacting post-production using crimped contacts. We detail the production of more than 2000 modules in one production run and show that the production technique is scalable and well suited for direct transfer to the printing industry employing existing production equipment. The production speed and cost analysis for the individual modules from this batch is discussed and a forecast for the high volume cost based on this method is given. Further, the points where significant cost reductions can be achieved are identified. The use of the solar cell as the power supply for a small radio and other small electronic circuits is demonstrated. Lastly, the operational stability under ambient conditions in the dark and under illumination is discussed.
Li Tang - One of the best experts on this subject based on the ideXlab platform.
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CSA: a web service for the Complete Process of ChIP-Seq analysis.
BMC Bioinformatics, 2019Co-Authors: Li Tang, Yi Pan, Jianxin WangAbstract:Chromatin immunoprecipitation sequencing (ChIP-seq) is a technology that combines chromatin immunoprecipitation (ChIP) with next generation of sequencing technology (NGS) to analyze protein interactions with DNA. At present, most ChIP-seq analysis tools adopt the command line, which lacks user-friendly interfaces. Although some web services with graphical interfaces have been developed for ChIP-seq analysis, these sites cannot provide a comprehensive analysis of ChIP-seq from raw data to downstream analysis. In this study, we develop a web service for the whole Process of ChIP-Seq Analysis (CSA), which covers mapping, quality control, peak calling, and downstream analysis. In addition, CSA provides a customization function for users to define their own workflows. And the visualization of mapping, peak calling, motif finding, and pathway analysis results are also provided in CSA. For the different types of ChIP-seq datasets, CSA can provide the corresponding tool to perform the analysis. Moreover, CSA can detect differences in ChIP signals between ChIP samples and controls to identify absolute binding sites. The two case studies demonstrate the effectiveness of CSA, which can Complete the whole procedure of ChIP-seq analysis. CSA provides a web interface for users, and implements the visualization of every analysis step. The website of CSA is available at http://CompuBio.csu.edu.cn
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CSA: a web service for the Complete Process of ChIP-Seq analysis
BMC Bioinformatics, 2019Co-Authors: Li Tang, Yi Pan, Jianxin WangAbstract:Abstract Background Chromatin immunoprecipitation sequencing (ChIP-seq) is a technology that combines chromatin immunoprecipitation (ChIP) with next generation of sequencing technology (NGS) to analyze protein interactions with DNA. At present, most ChIP-seq analysis tools adopt the command line, which lacks user-friendly interfaces. Although some web services with graphical interfaces have been developed for ChIP-seq analysis, these sites cannot provide a comprehensive analysis of ChIP-seq from raw data to downstream analysis. Results In this study, we develop a web service for the whole Process of ChIP-Seq Analysis (CSA), which covers mapping, quality control, peak calling, and downstream analysis. In addition, CSA provides a customization function for users to define their own workflows. And the visualization of mapping, peak calling, motif finding, and pathway analysis results are also provided in CSA. For the different types of ChIP-seq datasets, CSA can provide the corresponding tool to perform the analysis. Moreover, CSA can detect differences in ChIP signals between ChIP samples and controls to identify absolute binding sites. Conclusions The two case studies demonstrate the effectiveness of CSA, which can Complete the whole procedure of ChIP-seq analysis. CSA provides a web interface for users, and implements the visualization of every analysis step. The website of CSA is available at http://CompuBio.csu.edu.cn
Ming C. Lin - One of the best experts on this subject based on the ideXlab platform.
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Real-time sound synthesis and propagation for games
Communications of the ACM, 2007Co-Authors: Nikunj Raghuvanshi, Christian Lauterbach, Anish Chandak, Dinesh Manocha, Ming C. LinAbstract:Simulating the Complete Process of sound synthesis and propagation by exploiting aural perception makes the experience of playing games much more realistic and immersive.
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Simulating the Complete Process of sound synthesis and propagation by exploiting aural perception makes the experience of playing games much more realistic and immersive.
2007Co-Authors: Nikunj Raghuvanshi, Christian Lauterbach, Anish Chandak, Dinesh Manocha, Ming C. LinAbstract:he believability of a computer game depends on threemain components: graphics, behavior (includingphysics and AI), and sound. Thanks to years ofresearch in computer graphics and the advent of mod-ern graphics hardware, many of today’s games rendernear-photorealistic images at interactive rates. To fur-ther increase immersive gameplay, several recent games(such as Valve’s Half Life 2 and Crytek’s Far Cry) haveadded an integrated physics and behavior engine to enhance that realism, as objectsinteract with one another in a more physically plausible way. In contrast, sound gen-eration and propagation have not received as much attention due to the extremelyhigh computational cost for simulating realistic sounds. The state of the art for sound production in games, even those with integratedphysics engines, is to use recorded sound clips that aretriggered by events in theCAA }
Frederik C Krebs - One of the best experts on this subject based on the ideXlab platform.
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a Complete Process for production of flexible large area polymer solar cells entirely using screen printing first public demonstration
Solar Energy Materials and Solar Cells, 2009Co-Authors: Frederik C Krebs, Mikkel Jorgensen, Kion Norrman, Ole Hagemann, Jan Alstrup, Torben Damgaard Nielsen, Jan Fyenbo, Kaj Larsen, Jette KristensenAbstract:Abstract A Complete polymer solar cell module prepared in the ambient atmosphere under industrial conditions is presented. The versatility of the polymer solar cell technology is demonstrated through the use of abstract forms for the active area, a flexible substrate, Processing entirely from solution, Complete Processing in air using commonly available screen printing, and finally, simple mechanical encapsulation using a flexible packaging material and electrical contacting post-production using crimped contacts. We detail the production of more than 2000 modules in one production run and show that the production technique is scalable and well suited for direct transfer to the printing industry employing existing production equipment. The production speed and cost analysis for the individual modules from this batch is discussed and a forecast for the high volume cost based on this method is given. Further, the points where significant cost reductions can be achieved are identified. The use of the solar cell as the power supply for a small radio and other small electronic circuits is demonstrated. Lastly, the operational stability under ambient conditions in the dark and under illumination is discussed.
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A Complete Process for production of flexible large area polymer solar cells entirely using screen printing—First public demonstration
Solar Energy Materials and Solar Cells, 2009Co-Authors: Frederik C Krebs, Mikkel Jorgensen, Kion Norrman, Ole Hagemann, Jan Alstrup, Torben Damgaard Nielsen, Jan Fyenbo, Kaj Larsen, Jette KristensenAbstract:Abstract A Complete polymer solar cell module prepared in the ambient atmosphere under industrial conditions is presented. The versatility of the polymer solar cell technology is demonstrated through the use of abstract forms for the active area, a flexible substrate, Processing entirely from solution, Complete Processing in air using commonly available screen printing, and finally, simple mechanical encapsulation using a flexible packaging material and electrical contacting post-production using crimped contacts. We detail the production of more than 2000 modules in one production run and show that the production technique is scalable and well suited for direct transfer to the printing industry employing existing production equipment. The production speed and cost analysis for the individual modules from this batch is discussed and a forecast for the high volume cost based on this method is given. Further, the points where significant cost reductions can be achieved are identified. The use of the solar cell as the power supply for a small radio and other small electronic circuits is demonstrated. Lastly, the operational stability under ambient conditions in the dark and under illumination is discussed.