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Francesco Rovero - One of the best experts on this subject based on the ideXlab platform.
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Unraveling elephant-shrews: Phylogenetic relationships and unexpected introgression among giant sengis.
Molecular phylogenetics and evolution, 2020Co-Authors: Lucinda P. Lawson, Francesco Rovero, Jose Alfredo Samaniego Castruita, James Haile, Cristiano Vernesi, Eline D. LorenzenAbstract:Abstract Giant sengis, or elephant-shrews (Macroscelidea; Macroscelididae; Rhynchocyon), are small-bodied mammals found in central and eastern African forests. Studies have provided contrasting views of the extent and direction of introgression among species. We generated full mitochondrial genomes, and compiled publically available mtDNA 12S and nuclear vWF sequences from Rhynchocyon cirnei, R. petersi and R. udzungwensis that had not previously been analyzed in concert, to elucidate the phylogenetic and population-specific context of potential introgression. Our spatially and phylogenetically broad sampling across species revealed substantial, unidirectional mitochondrial introgression of the R. petersi lineage into R. cirnei reichardi and R. udzungwensis, and from R. udzungwensis into R. c. reichardi. All introgression was highly localized and found only in the eastern Udzungwa Mountains forests in Tanzania. The nuclear data showed another pattern, with R. petersi haplotypes in R. cirnei cirnei and R. c. reichardi. No individuals showed both mitochondrial and nuclear introgression. Our results suggest higher levels of hybridization among giant sengi species than previously recognized, but also highlight the need for further genome-wide analysis and increased spatial sampling to clarify the many aspects of diversification and introgression in this group.
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Brain Volume of the Newly-Discovered Species Rhynchocyon udzungwensis (Mammalia: Afrotheria: Macroscelidea): Implications for Encephalization in
2016Co-Authors: Jason A. Kaufman, Gregory H. Turner, Patricia A. Holroyd, Francesco Rovero, Ari GrossmanAbstract:The Gray-faced Sengi (Rhynchocyon udzungwensis) is a newly-discovered species of sengi (elephant-shrew) and is the largest known extant representative of the order Macroscelidea. The discovery of R. udzungwensis provides an opportunity to investigate the scaling relationship between brain size and body size within Macroscelidea, and to compare this allometry among insectivorous species of Afrotheria and other eutherian insectivores. We performed a spin-echo magnetic resonance imaging (MRI) scan on a preserved adult specimen of R. udzungwensis using a 7-Tesla high-field MR imaging system. The brain was manually segmented and its volume was compiled into a dataset containing previously-published allometric data on 56 other species of insectivore-grade mammals including representatives of Afrotheria, Soricomorpha and Erinaceomorpha. Results of log-linear regression indicate that R. udzungwensis exhibits a brain size that is consistent with the allometric trend described by other members of its order. Inter-specific comparisons indicate that Macroscelideans as a group have relatively large brains when compared with similarly-sized terrestrial mammals that also share a similar diet. This high degree of encephalization within sengis remains robust whether sengis are compared with closely-relate
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Brain volume of the newly-discovered species Rhynchocyon udzungwensis (Mammalia: Afrotheria: Macroscelidea): implications for encephalization in sengis.
PloS one, 2013Co-Authors: Jason A. Kaufman, Gregory H. Turner, Patricia A. Holroyd, Francesco Rovero, Ari GrossmanAbstract:The Gray-faced Sengi (Rhynchocyon udzungwensis) is a newly-discovered species of sengi (elephant-shrew) and is the largest known extant representative of the order Macroscelidea. The discovery of R. udzungwensis provides an opportunity to investigate the scaling relationship between brain size and body size within Macroscelidea, and to compare this allometry among insectivorous species of Afrotheria and other eutherian insectivores. We performed a spin-echo magnetic resonance imaging (MRI) scan on a preserved adult specimen of R. udzungwensis using a 7-Tesla high-field MR imaging system. The brain was manually segmented and its volume was compiled into a dataset containing previously-published allometric data on 56 other species of insectivore-grade mammals including representatives of Afrotheria, Soricomorpha and Erinaceomorpha. Results of log-linear regression indicate that R. udzungwensis exhibits a brain size that is consistent with the allometric trend described by other members of its order. Inter-specific comparisons indicate that Macroscelideans as a group have relatively large brains when compared with similarly-sized terrestrial mammals that also share a similar diet. This high degree of encephalization within sengis remains robust whether sengis are compared with closely-related insectivorous afrotheres, or with more-distantly-related insectivorous laurasiatheres.
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a new species of giant sengi or elephant shrew genus rhynchocyon highlights the exceptional biodiversity of the udzungwa mountains of tanzania
Journal of Zoology, 2008Co-Authors: Francesco Rovero, Galen B. Rathbun, Andrew Perkin, Trevor Jones, David O Ribble, C Leonard, R R Mwakisoma, Nike DoggartAbstract:A new species of sengi, or elephant-shrew, is described. It was discovered in the northern Udzungwa Mountains of Tanzania in 2005. Sengis (Order Macroscelidea, super-cohort Afrotheria) include four genera and 15 species of mammals that are endemic to Africa. This discovery is a significant contribution to the systematics of this small order. Based on 49 camera trap images, 40 sightings and five voucher specimens, the new sengi is diurnal and distinguished from the other three species of Rhynchocyon by a grizzled grey face, pale yellow to cream chest and chin, orange-rufous sides, maroon back and jet-black lower rump and thighs. The body weight of the new species is about 700 g, which is 25–50% greater than any other giant sengi. The new Rhynchocyon is only known from two populations that cover about 300 km2 of montane forest. It has an estimated density of 50–80 individuals km−2. This discovery has important implications for the conservation of the high biodiversity that is found in the forests of the Eastern Arc Mountains.
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A new species of giant sengi or elephant‐shrew (genus Rhynchocyon) highlights the exceptional biodiversity of the Udzungwa Mountains of Tanzania
Journal of Zoology, 2008Co-Authors: Francesco Rovero, Galen B. Rathbun, Andrew Perkin, Trevor Jones, David O Ribble, C Leonard, R R Mwakisoma, Nike DoggartAbstract:A new species of sengi, or elephant-shrew, is described. It was discovered in the northern Udzungwa Mountains of Tanzania in 2005. Sengis (Order Macroscelidea, super-cohort Afrotheria) include four genera and 15 species of mammals that are endemic to Africa. This discovery is a significant contribution to the systematics of this small order. Based on 49 camera trap images, 40 sightings and five voucher specimens, the new sengi is diurnal and distinguished from the other three species of Rhynchocyon by a grizzled grey face, pale yellow to cream chest and chin, orange-rufous sides, maroon back and jet-black lower rump and thighs. The body weight of the new species is about 700 g, which is 25–50% greater than any other giant sengi. The new Rhynchocyon is only known from two populations that cover about 300 km2 of montane forest. It has an estimated density of 50–80 individuals km−2. This discovery has important implications for the conservation of the high biodiversity that is found in the forests of the Eastern Arc Mountains.
Galen B. Rathbun - One of the best experts on this subject based on the ideXlab platform.
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Reconstructing the molecular phylogeny of giant sengis (Macroscelidea; Macroscelididae; Rhynchocyon).
Molecular phylogenetics and evolution, 2017Co-Authors: Elizabeth J. Carlen, Galen B. Rathbun, William T. Stanley, Link E. Olson, Christopher A. Sabuni, John P. DumbacherAbstract:Giant sengis (Macroscelidea; Macroscelididae; Rhynchocyon), also known as giant elephant-shrews, are small-bodied mammals that range from central through eastern Africa. Previous research on giant sengi systematics has relied primarily on pelage color and geographic distribution. Because some species have complex phenotypic variation and large geographic ranges, we used molecular markers to evaluate the phylogeny and taxonomy of the genus, which currently includes four species: R. chrysopygus, R. cirnei (six subspecies), R. petersi (two subspecies), and R. udzungwensis. We extracted DNA from fresh and historical museum samples from all taxa except one R. cirnei subspecies, and we generated and analyzed approximately 4700 aligned nucleotides (2685 bases of mitochondrial DNA and 2019 bases of nuclear DNA) to reconstruct a molecular phylogeny. We genetically evaluate Rhynchocyon spp. sequences previously published on GenBank, propose that the captive R. petersi population in North American zoos is likely R. p. adersi, and suggest that hybridization among taxa is not widespread in Rhynchocyon. The DNA sample we have from the distinctive but undescribed giant sengi from the Boni forest of northern coastal Kenya is unexpectedly nearly identical to R. chrysopygus, which will require further study. Our analyses support the current morphology-based taxonomy, with each recognized species forming a monophyletic clade, but we propose elevating R. c. stuhlmanni to a full species.
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A new species of round-eared sengi (genus Macroscelides) from Namibia
Journal of Mammalogy, 2014Co-Authors: John P. Dumbacher, Galen B. Rathbun, Timothy O. Osborne, Michael Griffin, Seth J. EisebAbstract:While studying the systematics and taxonomy of round-eared sengis (genus Macroscelides), we identified an unusual specimen from remote northwestern Namibia in the collection of the California Academy of Sciences. To determine if this represented a different species, we made 9 collecting trips with 5,616 trap-nights of effort that produced 16 voucher specimens (including the original specimen) of the unusual sengi. These specimens are distinguished from other Macroscelides species by morphological metrics (they are smaller), external features (rusty-tinged pelage, large subcaudal gland, and lack of dark skin pigment), and by divergence at 3 independently segregating DNA loci. These traits are the basis for the description of a new species of Macroscelides that seems to be confined to gravel plains associated with the distinctive reddish colored Etendeka geological formation of northwestern Namibia. The new species appears to be reproductively isolated from congeners, because portions of its distribution are sympatric with that of the Namib round-eared sengi (M. flavicaudatus), and we found no evidence of hybrid individuals or gene flow. The new species is allopatric with the Karoo round-eared sengi (M. proboscideus), which is found about 500 km to the south. The new species, along with M. flavicaudatus, is endemic to Namibia. With this 3rd species in the genus, there are now 19 recognized extant species in the order Macroscelidea.
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phylogeny and taxonomy of the round eared sengis or elephant shrews genus macroscelides mammalia afrotheria Macroscelidea
PLOS ONE, 2012Co-Authors: John P. Dumbacher, Galen B. Rathbun, Hanneline A Smit, Seth J. EisebAbstract:The round-eared sengis or elephant-shrews (genus Macroscelides) exhibit striking pelage variation throughout their ranges. Over ten taxonomic names have been proposed to describe this variation, but currently only two taxa are recognized (M. proboscideus proboscideus and M. p. flavicaudatus). Here, we review the taxonomic history of Macroscelides, and we use data on the geographic distribution, morphology, and mitochondrial DNA sequence to evaluate the current taxonomy. Our data support only two taxa that correspond to the currently recognized subspecies M. p. proboscideus and M. p. flavicaudatus. Mitochondrial haplotypes of these two taxa are reciprocally monophyletic with over 13% uncorrected sequence divergence between them. PCA analysis of 14 morphological characters (mostly cranial) grouped the two taxa into non-overlapping clusters, and body mass alone is a relatively reliable distinguishing character throughout much of Macroscelides range. Although fieldworkers were unable to find sympatric populations, the two taxa were found within 50 km of each other, and genetic analysis showed no evidence of gene flow. Based upon corroborating genetic data, morphological data, near sympatry with no evidence of gene flow, and differences in habitat use, we elevate these two forms to full species.
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Late Pleistocene potential distribution of the North African sengi or elephant-shrew Elephantulus rozeti (Mammalia: Macroscelidea)
African Zoology, 2010Co-Authors: Árpád S. Nyári, A. Townsend Peterson, Galen B. RathbunAbstract:The Sahara Desert was recently proposed as the agent of vicariant speciation in the North African elephant-shrew (order Macroscelidea, Elephantulus rozeti). Based on evidence from molecular dating, however, this speciation event was estimated as having occurred in the Miocene, an early date of origin for an extant species, predating the dramatic climatic fluctuations of the Pleistocene. Here, we explore the possibility of more recent connections of populations of this species across the Sahara Desert that would have facilitated faunal exchange through the Last Glacial Maximum. We used ecological niche modelling based on current climatic datasets and known occurrence points to develop models of present-day potential distributions of E. rozeti and related taxa. Given that the Miocene scenario was proposed based on a single set of evidence, we here provide a partial test based on an independent analysis of present and past potential distributions. Our results corroborate the idea of vicariance, but indicate ...
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Sengi (Elephant-Shrew) Observations from Northern Coastal Kenya
Journal of East African Natural History, 2010Co-Authors: Samuel A. Andanje, Bernard Agwanda, Grace Wambui Ngaruiya, Rajan Amin, Galen B. RathbunAbstract:The biodiversity of northern coastal Kenya is poorly understood because security problems and poor infrastructure have discouraged access to the area. However, the wooded areas in the region have great potential for harbouring unique and rare species, including sengis or elephant-shrews (Macroscelidea). Based on recent surveys of the Boni and Dodori National Reserves, which are between the Tana River and the Somali border, the ranges of the rufous sengi (Elephantulus rufescens) and four-toed sengi (Petrodromus tetradactylus) have been extended. Although the golden-rumped sengi (Rhynchocyon chrysopygus) of coastal Kenya south of the lower Tana River was assumed to occur in the Boni forest region, this now appears to be incorrect. The Rhynchocyon east of the lower Tana River is definitely not R. chrysopygus, but rather resembles taxa found hundreds of kilometres to the south. Determining the taxonomic status of what may be a new form of Rhynchocyon will require the collection of voucher specimens and DNA tissues for detailed analyses.
Michael J Stanhope - One of the best experts on this subject based on the ideXlab platform.
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the sahara as a vicariant agent and the role of miocene climatic events in the diversification of the mammalian order Macroscelidea elephant shrews
Proceedings of the National Academy of Sciences of the United States of America, 2003Co-Authors: Christophe J. Douady, Mark S Springer, François Catzeflis, Jaishree Raman, Michael J StanhopeAbstract:Although the Sahara is a major geographical feature of the African continent, its role in the diversification of animal species is not well understood. We present here a molecular phylogeny for members of the endemic African mammalian order Macroscelidea (elephant shrews) with molecular-clock calculations; this molecular phylogeny provides convincing evidence that the genus Elephantulus is diphyletic. Elephantulus rozeti, the only elephant shrew species that resides north of the Sahara, is the sister group of a species from a different genus (Petrodromus tetradactylus), which resides just south of the Sahara. The split between these taxa coincided with major Miocene climatic events, which triggered the cooling and aridification of midlatitude continental regions, and a shift in the Sahara from a tropical to an arid environment. Thus, the North African distribution of E. rozeti is not the result of dispersion from an eastern species of the genus, but instead the result of a vicariant event involving the formation of the Sahara. The splitting events involved with most Elephantulus species in our analysis appear to coincide with these climatic events. This coincidence suggests that the environmental consequences associated with this period played an important role in the radiation of this order of mammals. The strongly supported phylogeny provides compelling evidence for a complex history of mosaic evolution, including pronounced bradytelic morphological evolution in some lineages, accelerated morphological evolution in others, and a remarkably slow rate of evolution of the male reproductive structure.
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Molecular phylogenetic evidence confirming the Eulipotyphla concept and in support of hedgehogs as the sister group to shrews
Molecular Phylogenetics and Evolution, 2002Co-Authors: Christophe J. Douady, Pascale I. Chatelier, Wilfried W. De Jong, Mark S Springer, François Catzeflis, Ole Madsen, Michael J StanhopeAbstract:Abstract For more than a century, living insectivore-like mammals have been viewed as little removed from the ancestral mammalian stock based on their retention of numerous primitive characteristics. This circumstance has made “insectivores” a group of special interest in the study of mammalian evolution. Wagner (1855) included hedgehogs, moles, shrews, solenodons, golden moles, tenrecs, flying lemurs, tree shrews, and elephant shrews in Insectivora. Subsequently, morphologists excluded flying lemurs, tree shrews, and elephant shrews from Insectivora and placed these taxa in the orders Dermoptera, Scandentia, and Macroscelidea, respectively. The remaining insectivores constitute Lipotyphla, which is monophyletic based on morphology. In contrast, molecular data suggest that lipotyphlans are polyphyletic, with golden moles and tenrecs placed in their own order (Afrosoricida) in the superordinal group Afrotheria. Studies based on nuclear genes support the monophyly of the remaining lipotyphlans (=Eulipotyphla) whereas mitochondrial genome studies dissociate hedgehogs from moles and place the former as the first offshoot on the placental tree. One shortcoming of previous molecular studies investigating lipotyphlan relationships is limited taxonomic sampling. Here, we evaluate lipotyphlan relationships using the largest and taxonomically most diverse data set yet assembled for Lipotyphla. Our results provide convincing support for both lipotyphlan diphyly and the monophyly of Eulipotyphla. More surprisingly, we find strong evidence for a sister-group relationship between shrews and hedgehogs to the exclusion of moles.
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molecular phylogenetic evidence confirming the eulipotyphla concept and in support of hedgehogs as the sister group to shrews
Molecular Phylogenetics and Evolution, 2002Co-Authors: Christophe J. Douady, Pascale I. Chatelier, Wilfried W. De Jong, Mark S Springer, François Catzeflis, Ole Madsen, Michael J StanhopeAbstract:For more than a century, living insectivore-like mammals have been viewed as little removed from the ancestral mammalian stock based on their retention of numerous primitive characteristics. This circumstance has made "insectivores" a group of special interest in the study of mammalian evolution. included hedgehogs, moles, shrews, solenodons, golden moles, tenrecs, flying lemurs, tree shrews, and elephant shrews in Insectivora. Subsequently, morphologists excluded flying lemurs, tree shrews, and elephant shrews from Insectivora and placed these taxa in the orders Dermoptera, Scandentia, and Macroscelidea, respectively. The remaining insectivores constitute Lipotyphla, which is monophyletic based on morphology. In contrast, molecular data suggest that lipotyphlans are polyphyletic, with golden moles and tenrecs placed in their own order (Afrosoricida) in the superordinal group Afrotheria. Studies based on nuclear genes support the monophyly of the remaining lipotyphlans (=Eulipotyphla) whereas mitochondrial genome studies dissociate hedgehogs from moles and place the former as the first offshoot on the placental tree. One shortcoming of previous molecular studies investigating lipotyphlan relationships is limited taxonomic sampling. Here, we evaluate lipotyphlan relationships using the largest and taxonomically most diverse data set yet assembled for Lipotyphla. Our results provide convincing support for both lipotyphlan diphyly and the monophyly of Eulipotyphla. More surprisingly, we find strong evidence for a sister-group relationship between shrews and hedgehogs to the exclusion of moles.
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Additional support for Afrotheria and Paenungulata, the performance of mitochondrial versus nuclear genes, and the impact of data partitions with heterogeneous base composition.
Systematic biology, 1999Co-Authors: Mark S Springer, Heather M. Amrine, Angela Burk, Michael J StanhopeAbstract:We concatenated sequences for four mitochondrial genes (12S rRNA, tRNA valine, 16S rRNA, cytochrome b) and four nuclear genes [aquaporin, alpha 2B adrenergic receptor (A2AB), interphotoreceptor retinoid-binding protein (IRBP), von Willebrand factor (vWF)] into a multigene data set representing 11 eutherian orders (Artiodactyla, Hyracoidea, Insectivora, Lagomorpha, Macroscelidea, Perissodactyla, Primates, Proboscidea, Rodentia, Sirenia, Tubulidentata). Within this data set, we recognized nine mitochondrial partitions (both stems and loops, for each of 12S rRNA, tRNA valine, and 16S rRNA; and first, second, and third codon positions of cytochrome b) and 12 nuclear partitions (first, second, and third codon positions, respectively, of each of the four nuclear genes). Four of the 21 partitions (third positions of cytochrome b, A2AB, IRBP, and vWF) showed significant heterogeneity in base composition across taxa. Phylogenetic analyses (parsimony, minimum evolution, maximum likelihood) based on sequences for all 21 partitions provide 99-100% bootstrap support for Afrotheria and Paenungulata. With the elimination of the four partitions exhibiting heterogeneity in base composition, there is also high bootstrap support (89-100%) for cow + horse. Statistical tests reject Altungulata, Anagalida, and Ungulata. Data set heterogeneity between mitochondrial and nuclear genes is most evident when all partitions are included in the phylogenetic analyses. Mitochondrial-gene trees associate cow with horse, whereas nuclear-gene trees associate cow with hedgehog and these two with horse. However, after eliminating third positions of A2AB, IRBP, and vWF, nuclear data agree with mitochondrial data in supporting cow + horse. Nuclear genes provide stronger support for both Afrotheria and Paenungulata. Removal of third positions of cytochrome b results in improved performance for the mitochondrial genes in recovering these clades.
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Mammalian evolution and the interphotoreceptor retinoid binding protein (IRBP) gene: Convincing evidence for several superordinal clades
Journal of Molecular Evolution, 1996Co-Authors: Michael J Stanhope, Marta R. Smith, Victor G. Waddell, Calvin A. Porter, Mahmood S ShivjiAbstract:Phylogenetic relationships of 25 mammalian species representing 17 of the 18 eutherian orders were examined using DNA sequences from a 1.2-kb region of the 5′ end of exon 1 of the single-copy nuclear gene known as interphotoreceptor retinoid binding protein (IRBP). A wide variety of methods of analysis of the DNA sequence, and of the translated products, all supported a five-order clade consisting of elephant shrew (Macroscelidea)/aardvark (Tubulidentata)/and the paenungulates (hyracoids, sirenians, and elephants), with bootstrap support in all cases of 100%. The Paenungulata was also strongly supported by these IRBP data. In the majority of analyses this monophyletic five-order grouping was the first branch off the tree after the Edentata. These results are highly congruent with two other recent sources of molecular data. Another superordinal grouping, with similar 100% bootstrap support in all of the same wide-ranging types of analyses, was Artiodactyla/Cetacea. Other superordinal affinities, suggested by the analyses, but with less convincing support, included a Perissodactyla/Artiodactyla/Cetacea clade, an Insectivora/Chiroptera clade, and Glires (an association of rodents and lagomorphs).
Rodolphe Tabuce - One of the best experts on this subject based on the ideXlab platform.
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New remains of Chambius kasserinensis from the Eocene of Tunisia and evaluation of proposed affinities for Macroscelidea (Mammalia, Afrotheria)
Historical Biology, 2018Co-Authors: Rodolphe TabuceAbstract:Chambius kasserinensis from the late Early or early Middle Eocene Chambi locality, central Tunisia, is undoubtedly the oldest known macroscelidid and possibly the basalmost representative of the order Macroscelidea. Hence, since its discovery in 1986, Chambius has played a key role in analyses focusing on afrotherian and eutherian phylogeny; for instance, as early as 1995, Butler’s review of fossil Macroscelideans highlighted the central position of Chambius in the origin of the order. Despite this, Chambius remained poorly known until recently. Here based on new mandibular fragments, well-preserved upper molars and CT scan analysis of the holotype maxilla, Chambius is revised. Its dentition is first described in detail, providing a precise characterization of the genus. Chambius is notably defined by a submolariform P4 with a three-cusped talonid, a reduced talonid on M2, and a prominent metaconule on M1−2. Interestingly, the two transverse lophs of the upper molars are basically formed by preconulecristae, evoking the recently defined peculiar bilophodonty of paenungulates. Comparisons with other Paleogene and modern macroscelidids, European Louisinidae, and North American Apheliscidae are also made, allowing the various hypotheses about the origin and early evolution of macroscelidids to be reviewed.
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new remains of chambius kasserinensis from the eocene of tunisia and evaluation of proposed affinities for Macroscelidea mammalia afrotheria
Historical Biology, 2018Co-Authors: Rodolphe TabuceAbstract:AbstractChambius kasserinensis from the late Early or early Middle Eocene Chambi locality, central Tunisia, is undoubtedly the oldest known macroscelidid and possibly the basalmost representative of the order Macroscelidea. Hence, since its discovery in 1986, Chambius has played a key role in analyses focusing on afrotherian and eutherian phylogeny; for instance, as early as 1995, Butler’s review of fossil Macroscelideans highlighted the central position of Chambius in the origin of the order. Despite this, Chambius remained poorly known until recently. Here based on new mandibular fragments, well-preserved upper molars and CT scan analysis of the holotype maxilla, Chambius is revised. Its dentition is first described in detail, providing a precise characterization of the genus. Chambius is notably defined by a submolariform P4 with a three-cusped talonid, a reduced talonid on M2, and a prominent metaconule on M1−2. Interestingly, the two transverse lophs of the upper molars are basically formed by precon...
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Dental and tarsal morphology of the European Paleocene/Eocene “condylarth ” mammal Microhyus
2016Co-Authors: Rodolphe Tabuce, Miguel Telles Antunes, Richard Smith, Thierry SmithAbstract:New dental and postcranial remains of the alleged louisinine hyopsodontid “condylarth ” Microhyus from the European Paleocene/Eocene transition are described, and prompt a reevaluation of the genus. New specimens belonging to Microhyus musculus from Dormaal (MP7, Belgium) provide the first evidence of the lower dentition of the type species. We describe M. musculus? from Pourcy (MP7, France) and cf. Microhyus sp. from Berru (MP6a, France). A rich original assemblage of M. reisi from Silveirinha (MP7, Portugal) allows a detailed description of the morphological dental varia− tion within that species. Well−preserved astragali and calcanei from Silveirinha can be confidently attributed to Microhyus reisi. Functional analysis of these elements suggests that Microhyus was a terrestrial mammal capable of rapid running or jumping. The pedal morphology of Microhyus is very similar to that of Paschatherium. These louisinines share some derived characters with the hyopsodontids Apheliscus and Haplomylus (e.g., the occurrence of a cotylar fossa on the astragalus) but they differ from Hyopsodus. Therefore, in view of the pedal morphology alone, the hyopsodontids may be polyphyletic. Given the dental similarities between Microhyus and the early representatives of the order Macroscelidea, we compared the tarsal morphology of louisinines with that of modern macroscelidids (Paleogene tarsal remains are currently unknown for this group). Macroscelidids and louisinines present some similarities in their astragalar morphology; however, the macroscelidid astragalus appears to be too specialized to be compared with that o
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Petrosal and Bony Labyrinth Morphology Supports Paraphyly of Elephantulus Within Macroscelididae (Mammalia, Afrotheria)
Journal of Mammalian Evolution, 2014Co-Authors: Julien Benoit, Samuel Merigeaud, Nick Crumpton, Rodolphe TabuceAbstract:Interest in the phylogeny of Macroscelididae (sengis or elephant shrews) has been prompted by molecular studies indicating that Elephantulus rozeti is best placed as the sister group of Petrodromus tetradactylus (this clade being in turn the sister taxon to Macroscelides proboscideus ) than among other species of the genus Elephantulus . Until now, no discrete morphological characters have been proposed to support the grouping of E. rozeti , Petrodromus , and Macroscelides into this single so-called ‘Panelephantulus’ clade. Here, we employed μCT scanning in order to investigate the petrosal and bony labyrinth (bony capsule of the inner ear) morphology of most species of extant Macroscelididae. We performed a cladistic analysis on ear traits and found that despite some convergences (e.g., concerning the bony arterial canals in Macroscelides and Rhynchocyon ) the middle and inner ear morphology furnishes significant support for the ‘Panelephantulus’ clade. In our analysis, this clade is unambigously supported by the presence of a fully ossified stapediofacial tube. Two additional characters (the presence of a bony septum at the mouth of the fenestra cochleae dividing the D3 sinus into two distinct cavities and the absence of an accessory lateral pneumatic fossa) could also support ‘Panelephantulus.’ These newly discovered morphological characters support the molecular phylogenies published and highlight the importance of coding hitherto difficult to sample morphologies within cladistic analyses using micro-CT techniques. Taxonomic implications are briefly discussed.
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The petrosal of the earliest elephant-shrew Chambius (Macroscelidea: Afrotheria) from the Eocene of Djebel Chambi (Tunisia) and the evolution of middle and inner ear of elephant-shrews
Journal of Systematic Palaeontology, 2013Co-Authors: Julien Benoit, Maeva J. Orliac, Rodolphe TabuceAbstract:Macroscelidea (elephant-shrews or sengis) are small insectivorous mammals restricted to Africa; they belong to the super-cohort Afrotheria along with other insectivorans (aardvarks, tenrecs and golden moles) and ungulates (elephants, sea cows and hyraxes). Though their fossil record extends back to the Eocene, cranial remains of Palaeogene elephant-shrews, including the middle and inner ear structure, remain unknown. Two macroscelid isolated petrosal bones are described from the late Early–early Middle Eocene Djebel Chambi locality in Tunisia. Chambius kasserinensis is the only macroscelid represented in this locality. A cladistic analysis based on petrosal and inner ear characters highlights the crucial interest of the petrosal and inner ear morphology for understanding the evolution of Macroscelididae. It confirms the attribution of these isolated petrosals to C. kasserinensis. This hypothesis is supported by a common pattern of circulatory system, the morphology of the rostral and caudal tympanic proce...
John P. Dumbacher - One of the best experts on this subject based on the ideXlab platform.
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Reconstructing the molecular phylogeny of giant sengis (Macroscelidea; Macroscelididae; Rhynchocyon).
Molecular phylogenetics and evolution, 2017Co-Authors: Elizabeth J. Carlen, Galen B. Rathbun, William T. Stanley, Link E. Olson, Christopher A. Sabuni, John P. DumbacherAbstract:Giant sengis (Macroscelidea; Macroscelididae; Rhynchocyon), also known as giant elephant-shrews, are small-bodied mammals that range from central through eastern Africa. Previous research on giant sengi systematics has relied primarily on pelage color and geographic distribution. Because some species have complex phenotypic variation and large geographic ranges, we used molecular markers to evaluate the phylogeny and taxonomy of the genus, which currently includes four species: R. chrysopygus, R. cirnei (six subspecies), R. petersi (two subspecies), and R. udzungwensis. We extracted DNA from fresh and historical museum samples from all taxa except one R. cirnei subspecies, and we generated and analyzed approximately 4700 aligned nucleotides (2685 bases of mitochondrial DNA and 2019 bases of nuclear DNA) to reconstruct a molecular phylogeny. We genetically evaluate Rhynchocyon spp. sequences previously published on GenBank, propose that the captive R. petersi population in North American zoos is likely R. p. adersi, and suggest that hybridization among taxa is not widespread in Rhynchocyon. The DNA sample we have from the distinctive but undescribed giant sengi from the Boni forest of northern coastal Kenya is unexpectedly nearly identical to R. chrysopygus, which will require further study. Our analyses support the current morphology-based taxonomy, with each recognized species forming a monophyletic clade, but we propose elevating R. c. stuhlmanni to a full species.
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Petrosaltator gen. nov., a new genus replacement for the North African sengi Elephantulus rozeti (Macroscelidea; Macroscelididae).
Zootaxa, 2016Co-Authors: John P. DumbacherAbstract:In 2003, a molecular phylogeny was published that examined the role of the Sahara Desert as a vicariant event in the evolution of sengis (also known as elephant-shrews.) The phylogeny included a single sample from the North African sengi, Elephantulus rozeti (Duvernoy, 1833), which was found to be more closely related to the sengi genus Petrodromus Peters, 1846 than to other Elephantulus . Here we independently test the monophyly of Elephantulus using an additional specimen of E. rozeti and similar phylogenetic analyses, and discuss additional morphological and behavioral data that support the phylogeny. We propose a revised taxonomy that reflects the current paraphyly of Elephantulus and the sister relationship of E. rozeti and Petrodromus , including a new genus name for the North African sengi, Petrosaltator rozeti gen. nov., nov. comb. We additionally define two tribes within the subfamily Macroscelidinae, the Macroscelidini (including Macroscelides , Petrodromus , and Petrosaltator ), and the Elephantulini (including all other members of Elephantulus ).
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A new species of round-eared sengi (genus Macroscelides) from Namibia
Journal of Mammalogy, 2014Co-Authors: John P. Dumbacher, Galen B. Rathbun, Timothy O. Osborne, Michael Griffin, Seth J. EisebAbstract:While studying the systematics and taxonomy of round-eared sengis (genus Macroscelides), we identified an unusual specimen from remote northwestern Namibia in the collection of the California Academy of Sciences. To determine if this represented a different species, we made 9 collecting trips with 5,616 trap-nights of effort that produced 16 voucher specimens (including the original specimen) of the unusual sengi. These specimens are distinguished from other Macroscelides species by morphological metrics (they are smaller), external features (rusty-tinged pelage, large subcaudal gland, and lack of dark skin pigment), and by divergence at 3 independently segregating DNA loci. These traits are the basis for the description of a new species of Macroscelides that seems to be confined to gravel plains associated with the distinctive reddish colored Etendeka geological formation of northwestern Namibia. The new species appears to be reproductively isolated from congeners, because portions of its distribution are sympatric with that of the Namib round-eared sengi (M. flavicaudatus), and we found no evidence of hybrid individuals or gene flow. The new species is allopatric with the Karoo round-eared sengi (M. proboscideus), which is found about 500 km to the south. The new species, along with M. flavicaudatus, is endemic to Namibia. With this 3rd species in the genus, there are now 19 recognized extant species in the order Macroscelidea.
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phylogeny and taxonomy of the round eared sengis or elephant shrews genus macroscelides mammalia afrotheria Macroscelidea
PLOS ONE, 2012Co-Authors: John P. Dumbacher, Galen B. Rathbun, Hanneline A Smit, Seth J. EisebAbstract:The round-eared sengis or elephant-shrews (genus Macroscelides) exhibit striking pelage variation throughout their ranges. Over ten taxonomic names have been proposed to describe this variation, but currently only two taxa are recognized (M. proboscideus proboscideus and M. p. flavicaudatus). Here, we review the taxonomic history of Macroscelides, and we use data on the geographic distribution, morphology, and mitochondrial DNA sequence to evaluate the current taxonomy. Our data support only two taxa that correspond to the currently recognized subspecies M. p. proboscideus and M. p. flavicaudatus. Mitochondrial haplotypes of these two taxa are reciprocally monophyletic with over 13% uncorrected sequence divergence between them. PCA analysis of 14 morphological characters (mostly cranial) grouped the two taxa into non-overlapping clusters, and body mass alone is a relatively reliable distinguishing character throughout much of Macroscelides range. Although fieldworkers were unable to find sympatric populations, the two taxa were found within 50 km of each other, and genetic analysis showed no evidence of gene flow. Based upon corroborating genetic data, morphological data, near sympatry with no evidence of gene flow, and differences in habitat use, we elevate these two forms to full species.
