The Experts below are selected from a list of 1365 Experts worldwide ranked by ideXlab platform
Elizabeth Saunders - One of the best experts on this subject based on the ideXlab platform.
-
complete genome sequence of methanoculleus marisnigri romesser et al 1981 type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Matt NolanAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
-
complete genome sequence of methanoculleus marisnigri romesser et al 1981 type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Matt NolanAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
-
complete genome sequence of methanoculleus marisnigri type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Eugene Goltsman, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Thomas BrettinAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
-
complete genome sequence of methanoculleus marisnigri type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Eugene Goltsman, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Thomas BrettinAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
Iain Anderson - One of the best experts on this subject based on the ideXlab platform.
-
complete genome sequence of methanoculleus marisnigri romesser et al 1981 type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Matt NolanAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
-
complete genome sequence of methanoculleus marisnigri romesser et al 1981 type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Matt NolanAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
-
genomic characterization of Methanomicrobiales reveals three classes of methanogens
2009Co-Authors: Iain Anderson, Magdalena Sieprawskalupa, Luke E Ulrich, Boguslaw Lupa, Dwi Susanti, Iris Porat, Sean D Hooper, Athanasios Lykidis, Lakshmi Dharmarajan, Eugene GoltsmanAbstract:Background Methanomicrobiales is the least studied order of methanogens. While these organisms appear to be more closely related to the Methanosarcinales in ribosomal-based phylogenetic analyses, they are metabolically more similar to Class I methanogens. Methodology/Principal Findings In order to improve our understanding of this lineage, we have completely sequenced the genomes of two members of this order, Methanocorpusculum labreanum Z and Methanoculleus marisnigri JR1, and compared them with the genome of a third, Methanospirillum hungatei JF-1. Similar to Class I methanogens, Methanomicrobiales use a partial reductive citric acid cycle for 2-oxoglutarate biosynthesis, and they have the Eha energy-converting hydrogenase. In common with Methanosarcinales, Methanomicrobiales possess the Ech hydrogenase and at least some of them may couple formylmethanofuran formation and heterodisulfide reduction to transmembrane ion gradients. Uniquely, M. labreanum and M. hungatei contain hydrogenases similar to the Pyrococcus furiosus Mbh hydrogenase, and all three Methanomicrobiales have anti-sigma factor and anti-anti-sigma factor regulatory proteins not found in other methanogens. Phylogenetic analysis based on seven core proteins of methanogenesis and cofactor biosynthesis places the Methanomicrobiales equidistant from Class I methanogens and Methanosarcinales. Conclusions/Significance Our results indicate that Methanomicrobiales, rather than being similar to Class I methanogens or Methanomicrobiales, share some features of both and have some unique properties. We find that there are three distinct classes of methanogens: the Class I methanogens, the Methanomicrobiales (Class II), and the Methanosarcinales (Class III).
-
complete genome sequence of methanoculleus marisnigri type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Eugene Goltsman, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Thomas BrettinAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
-
complete genome sequence of methanoculleus marisnigri type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Eugene Goltsman, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Thomas BrettinAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
Magdalena Sieprawskalupa - One of the best experts on this subject based on the ideXlab platform.
-
complete genome sequence of methanoculleus marisnigri romesser et al 1981 type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Matt NolanAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
-
complete genome sequence of methanoculleus marisnigri romesser et al 1981 type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Matt NolanAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
-
genomic characterization of Methanomicrobiales reveals three classes of methanogens
2009Co-Authors: Iain Anderson, Magdalena Sieprawskalupa, Luke E Ulrich, Boguslaw Lupa, Dwi Susanti, Iris Porat, Sean D Hooper, Athanasios Lykidis, Lakshmi Dharmarajan, Eugene GoltsmanAbstract:Background Methanomicrobiales is the least studied order of methanogens. While these organisms appear to be more closely related to the Methanosarcinales in ribosomal-based phylogenetic analyses, they are metabolically more similar to Class I methanogens. Methodology/Principal Findings In order to improve our understanding of this lineage, we have completely sequenced the genomes of two members of this order, Methanocorpusculum labreanum Z and Methanoculleus marisnigri JR1, and compared them with the genome of a third, Methanospirillum hungatei JF-1. Similar to Class I methanogens, Methanomicrobiales use a partial reductive citric acid cycle for 2-oxoglutarate biosynthesis, and they have the Eha energy-converting hydrogenase. In common with Methanosarcinales, Methanomicrobiales possess the Ech hydrogenase and at least some of them may couple formylmethanofuran formation and heterodisulfide reduction to transmembrane ion gradients. Uniquely, M. labreanum and M. hungatei contain hydrogenases similar to the Pyrococcus furiosus Mbh hydrogenase, and all three Methanomicrobiales have anti-sigma factor and anti-anti-sigma factor regulatory proteins not found in other methanogens. Phylogenetic analysis based on seven core proteins of methanogenesis and cofactor biosynthesis places the Methanomicrobiales equidistant from Class I methanogens and Methanosarcinales. Conclusions/Significance Our results indicate that Methanomicrobiales, rather than being similar to Class I methanogens or Methanomicrobiales, share some features of both and have some unique properties. We find that there are three distinct classes of methanogens: the Class I methanogens, the Methanomicrobiales (Class II), and the Methanosarcinales (Class III).
-
complete genome sequence of methanoculleus marisnigri type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Eugene Goltsman, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Thomas BrettinAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
-
complete genome sequence of methanoculleus marisnigri type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Eugene Goltsman, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Thomas BrettinAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
Kerrie Barry - One of the best experts on this subject based on the ideXlab platform.
-
complete genome sequence of methanoculleus marisnigri romesser et al 1981 type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Matt NolanAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
-
complete genome sequence of methanoculleus marisnigri romesser et al 1981 type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Matt NolanAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
-
complete genome sequence of methanoculleus marisnigri type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Eugene Goltsman, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Thomas BrettinAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
-
complete genome sequence of methanoculleus marisnigri type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Eugene Goltsman, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Thomas BrettinAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
Alla Lapidus - One of the best experts on this subject based on the ideXlab platform.
-
complete genome sequence of methanoculleus marisnigri romesser et al 1981 type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Matt NolanAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
-
complete genome sequence of methanoculleus marisnigri romesser et al 1981 type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Matt NolanAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
-
complete genome sequence of methanoculleus marisnigri type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Eugene Goltsman, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Thomas BrettinAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.
-
complete genome sequence of methanoculleus marisnigri type strain jr1
2009Co-Authors: Iain Anderson, Eileen Dalin, Eugene Goltsman, Magdalena Sieprawskalupa, Elizabeth Saunders, Alla Lapidus, Hope Tice, Alex Copeland, Kerrie Barry, Thomas BrettinAbstract:Methanoculleus marisnigri Romesser et al. 1981 is a methanogen belonging to the order Methanomicrobiales within the archaeal phylum Euryarchaeota. The type strain, JR1, was isolated from anoxic sediments of the Black Sea. M. marisnigri is of phylogenetic interest because at the time the sequencing project began only one genome had previously been sequenced from the order Methanomicrobiales. We report here the complete genome sequence of M. marisnigri type strain JR1 and its annotation. This is part of a Joint Genome Institute 2006 Community Sequencing Program to sequence genomes of diverse Archaea.