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T B K Reddy - One of the best experts on this subject based on the ideXlab platform.
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High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482T, isolated from raw cow milk
Standards in Genomic Sciences, 2017Co-Authors: Sivan Laviad-shitrit, Dimitrios Stamatis, Neha Varghese, Markus Göker, Marcel Huntemann, Manoj Pillay, Krishnaveni Palaniappan, Alicia Clum, Natalia Mikhailova, T B K ReddyAbstract:Chryseobacterium bovis DSM 19482T (Hantsis-Zacharov et al., Int J Syst Evol Microbiol 58:1024-1028, 2008) is a Gram-negative, rod shaped, non-motile, facultative anaerobe, chemoorganotroph bacterium. C. bovis is a member of the Flavobacteriaceae, a family within the phylum Bacteroidetes. It was isolated when psychrotolerant bacterial communities in raw milk and their proteolytic and lipolytic traits were studied. Here we describe the features of this organism, together with the draft genome sequence and annotation. The DNA G + C content is 38.19%. The chromosome length is 3,346,045 bp. It encodes 3236 proteins and 105 RNA genes. The C. bovis genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand Microbial genomes study.
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High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775T, a plant pathogen of French bean pods
Standards in Genomic Sciences, 2016Co-Authors: Yana Aizenberg-gershtein, T B K Reddy, Ido Izhaki, Victor Markowitz, Markus Göker, Alla Lapidus, Marcel Huntemann, Manoj Pillay, Alex Copeland, Tanja WoykeAbstract:Phaseolibacter flectens strain ATCC 12775T (Halpern et al., Int J Syst Evol Microbiol 63:268–273, 2013) is a Gram-negative, rod shaped, motile, aerobic, chemoorganotroph bacterium. Ph. flectens is as a plant-pathogenic bacterium on pods of French bean and was first identified by Johnson (1956) as Pseudomonas flectens. After its phylogenetic position was reexamined, Pseudomonas flectens was transferred to the family Enterobacteriaceae as Phaseolibacter flectens gen. nov., comb. nov. Here we describe the features of this organism, together with the draft genome sequence and annotation. The DNA GC content is 44.34 mol%. The chromosome length is 2,748,442 bp. It encodes 2,437 proteins and 89 RNA genes. Ph. flectens genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand Microbial genomes study.
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High quality draft genome sequence of Leucobacter chironomi strain MM2LB^T (DSM 19883^T) isolated from a Chironomus sp. egg mass
Standards in Genomic Sciences, 2015Co-Authors: Sivan Laviad, T B K Reddy, Alla Lapidus, Marcel Huntemann, Alex Copeland, Amrita Pati, Natalia N Ivanova, Victor M Markowitz, Rüdiger Pukall, Hans-peter KlenkAbstract:Leucobacter chironomi strain MM2LB^T (Halpern et al., Int J Syst Evol Microbiol 59:665-70 2009) is a Gram-positive, rod shaped, non-motile, aerobic, chemoorganotroph bacterium. L. chironomi belongs to the family Microbacteriaceae , a family within the class Actinobacteria . Strain MM2LB^T was isolated from a chironomid ( Diptera; Chironomidae ) egg mass that was sampled from a waste stabilization pond in northern Israel. In a phylogenetic tree based on 16S rRNA gene sequences, strain MM2LB^T formed a distinct branch within the radiation encompassing the genus Leucobacter . Here we describe the features of this organism, together with the complete genome sequence and annotation. The DNA GC content is 69.90%. The chromosome length is 2,964,712 bp. It encodes 2,690 proteins and 61 RNA genes. L. chironomi genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand Microbial genomes (KMG) project.
Marcel Huntemann - One of the best experts on this subject based on the ideXlab platform.
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High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482T, isolated from raw cow milk
Standards in Genomic Sciences, 2017Co-Authors: Sivan Laviad-shitrit, Dimitrios Stamatis, Neha Varghese, Markus Göker, Marcel Huntemann, Manoj Pillay, Krishnaveni Palaniappan, Alicia Clum, Natalia Mikhailova, T B K ReddyAbstract:Chryseobacterium bovis DSM 19482T (Hantsis-Zacharov et al., Int J Syst Evol Microbiol 58:1024-1028, 2008) is a Gram-negative, rod shaped, non-motile, facultative anaerobe, chemoorganotroph bacterium. C. bovis is a member of the Flavobacteriaceae, a family within the phylum Bacteroidetes. It was isolated when psychrotolerant bacterial communities in raw milk and their proteolytic and lipolytic traits were studied. Here we describe the features of this organism, together with the draft genome sequence and annotation. The DNA G + C content is 38.19%. The chromosome length is 3,346,045 bp. It encodes 3236 proteins and 105 RNA genes. The C. bovis genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand Microbial genomes study.
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High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775T, a plant pathogen of French bean pods
Standards in Genomic Sciences, 2016Co-Authors: Yana Aizenberg-gershtein, T B K Reddy, Ido Izhaki, Victor Markowitz, Markus Göker, Alla Lapidus, Marcel Huntemann, Manoj Pillay, Alex Copeland, Tanja WoykeAbstract:Phaseolibacter flectens strain ATCC 12775T (Halpern et al., Int J Syst Evol Microbiol 63:268–273, 2013) is a Gram-negative, rod shaped, motile, aerobic, chemoorganotroph bacterium. Ph. flectens is as a plant-pathogenic bacterium on pods of French bean and was first identified by Johnson (1956) as Pseudomonas flectens. After its phylogenetic position was reexamined, Pseudomonas flectens was transferred to the family Enterobacteriaceae as Phaseolibacter flectens gen. nov., comb. nov. Here we describe the features of this organism, together with the draft genome sequence and annotation. The DNA GC content is 44.34 mol%. The chromosome length is 2,748,442 bp. It encodes 2,437 proteins and 89 RNA genes. Ph. flectens genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand Microbial genomes study.
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High quality draft genome sequence of Leucobacter chironomi strain MM2LB^T (DSM 19883^T) isolated from a Chironomus sp. egg mass
Standards in Genomic Sciences, 2015Co-Authors: Sivan Laviad, T B K Reddy, Alla Lapidus, Marcel Huntemann, Alex Copeland, Amrita Pati, Natalia N Ivanova, Victor M Markowitz, Rüdiger Pukall, Hans-peter KlenkAbstract:Leucobacter chironomi strain MM2LB^T (Halpern et al., Int J Syst Evol Microbiol 59:665-70 2009) is a Gram-positive, rod shaped, non-motile, aerobic, chemoorganotroph bacterium. L. chironomi belongs to the family Microbacteriaceae , a family within the class Actinobacteria . Strain MM2LB^T was isolated from a chironomid ( Diptera; Chironomidae ) egg mass that was sampled from a waste stabilization pond in northern Israel. In a phylogenetic tree based on 16S rRNA gene sequences, strain MM2LB^T formed a distinct branch within the radiation encompassing the genus Leucobacter . Here we describe the features of this organism, together with the complete genome sequence and annotation. The DNA GC content is 69.90%. The chromosome length is 2,964,712 bp. It encodes 2,690 proteins and 61 RNA genes. L. chironomi genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand Microbial genomes (KMG) project.
Manoj Pillay - One of the best experts on this subject based on the ideXlab platform.
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High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482T, isolated from raw cow milk
Standards in Genomic Sciences, 2017Co-Authors: Sivan Laviad-shitrit, Dimitrios Stamatis, Neha Varghese, Markus Göker, Marcel Huntemann, Manoj Pillay, Krishnaveni Palaniappan, Alicia Clum, Natalia Mikhailova, T B K ReddyAbstract:Chryseobacterium bovis DSM 19482T (Hantsis-Zacharov et al., Int J Syst Evol Microbiol 58:1024-1028, 2008) is a Gram-negative, rod shaped, non-motile, facultative anaerobe, chemoorganotroph bacterium. C. bovis is a member of the Flavobacteriaceae, a family within the phylum Bacteroidetes. It was isolated when psychrotolerant bacterial communities in raw milk and their proteolytic and lipolytic traits were studied. Here we describe the features of this organism, together with the draft genome sequence and annotation. The DNA G + C content is 38.19%. The chromosome length is 3,346,045 bp. It encodes 3236 proteins and 105 RNA genes. The C. bovis genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand Microbial genomes study.
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High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775T, a plant pathogen of French bean pods
Standards in Genomic Sciences, 2016Co-Authors: Yana Aizenberg-gershtein, T B K Reddy, Ido Izhaki, Victor Markowitz, Markus Göker, Alla Lapidus, Marcel Huntemann, Manoj Pillay, Alex Copeland, Tanja WoykeAbstract:Phaseolibacter flectens strain ATCC 12775T (Halpern et al., Int J Syst Evol Microbiol 63:268–273, 2013) is a Gram-negative, rod shaped, motile, aerobic, chemoorganotroph bacterium. Ph. flectens is as a plant-pathogenic bacterium on pods of French bean and was first identified by Johnson (1956) as Pseudomonas flectens. After its phylogenetic position was reexamined, Pseudomonas flectens was transferred to the family Enterobacteriaceae as Phaseolibacter flectens gen. nov., comb. nov. Here we describe the features of this organism, together with the draft genome sequence and annotation. The DNA GC content is 44.34 mol%. The chromosome length is 2,748,442 bp. It encodes 2,437 proteins and 89 RNA genes. Ph. flectens genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand Microbial genomes study.
Markus Göker - One of the best experts on this subject based on the ideXlab platform.
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High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482T, isolated from raw cow milk
Standards in Genomic Sciences, 2017Co-Authors: Sivan Laviad-shitrit, Dimitrios Stamatis, Neha Varghese, Markus Göker, Marcel Huntemann, Manoj Pillay, Krishnaveni Palaniappan, Alicia Clum, Natalia Mikhailova, T B K ReddyAbstract:Chryseobacterium bovis DSM 19482T (Hantsis-Zacharov et al., Int J Syst Evol Microbiol 58:1024-1028, 2008) is a Gram-negative, rod shaped, non-motile, facultative anaerobe, chemoorganotroph bacterium. C. bovis is a member of the Flavobacteriaceae, a family within the phylum Bacteroidetes. It was isolated when psychrotolerant bacterial communities in raw milk and their proteolytic and lipolytic traits were studied. Here we describe the features of this organism, together with the draft genome sequence and annotation. The DNA G + C content is 38.19%. The chromosome length is 3,346,045 bp. It encodes 3236 proteins and 105 RNA genes. The C. bovis genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand Microbial genomes study.
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High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775T, a plant pathogen of French bean pods
Standards in Genomic Sciences, 2016Co-Authors: Yana Aizenberg-gershtein, T B K Reddy, Ido Izhaki, Victor Markowitz, Markus Göker, Alla Lapidus, Marcel Huntemann, Manoj Pillay, Alex Copeland, Tanja WoykeAbstract:Phaseolibacter flectens strain ATCC 12775T (Halpern et al., Int J Syst Evol Microbiol 63:268–273, 2013) is a Gram-negative, rod shaped, motile, aerobic, chemoorganotroph bacterium. Ph. flectens is as a plant-pathogenic bacterium on pods of French bean and was first identified by Johnson (1956) as Pseudomonas flectens. After its phylogenetic position was reexamined, Pseudomonas flectens was transferred to the family Enterobacteriaceae as Phaseolibacter flectens gen. nov., comb. nov. Here we describe the features of this organism, together with the draft genome sequence and annotation. The DNA GC content is 44.34 mol%. The chromosome length is 2,748,442 bp. It encodes 2,437 proteins and 89 RNA genes. Ph. flectens genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand Microbial genomes study.
Tanja Woyke - One of the best experts on this subject based on the ideXlab platform.
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High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775T, a plant pathogen of French bean pods
Standards in Genomic Sciences, 2016Co-Authors: Yana Aizenberg-gershtein, T B K Reddy, Ido Izhaki, Victor Markowitz, Markus Göker, Alla Lapidus, Marcel Huntemann, Manoj Pillay, Alex Copeland, Tanja WoykeAbstract:Phaseolibacter flectens strain ATCC 12775T (Halpern et al., Int J Syst Evol Microbiol 63:268–273, 2013) is a Gram-negative, rod shaped, motile, aerobic, chemoorganotroph bacterium. Ph. flectens is as a plant-pathogenic bacterium on pods of French bean and was first identified by Johnson (1956) as Pseudomonas flectens. After its phylogenetic position was reexamined, Pseudomonas flectens was transferred to the family Enterobacteriaceae as Phaseolibacter flectens gen. nov., comb. nov. Here we describe the features of this organism, together with the draft genome sequence and annotation. The DNA GC content is 44.34 mol%. The chromosome length is 2,748,442 bp. It encodes 2,437 proteins and 89 RNA genes. Ph. flectens genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand Microbial genomes study.
