Seasonal Growth

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E.vanilla Kumari - One of the best experts on this subject based on the ideXlab platform.

G Subba Rangaiah - One of the best experts on this subject based on the ideXlab platform.

Derek H. Ogle - One of the best experts on this subject based on the ideXlab platform.

  • A technical note on Seasonal Growth models
    Reviews in Fish Biology and Fisheries, 2012
    Co-Authors: Emili García-berthou, Gerard Carmona-catot, Roberto Merciai, Derek H. Ogle
    Abstract:

    The Growth of many organisms is Seasonal, with a dependence on variation in temperature, light, and food availability. A Growth model proposed by Somers (Fishbyte 6:8–11, 1988) is one of the most widely used models to describe Seasonal Growth. We point out that three different formulae (beyond numerous typographical errors) have been used in the literature referring to Somers (Fishbyte 6:8–11, 1988). These formulae correspond to different curves and yield different parameter estimates with different biological interpretations. These inconsistencies have led to the wrong identification of the period of lowest Growth rate (winter point) in some papers of the literature. We urge authors to carefully edit their formulae to assure use of the original definition in Somers (Fishbyte 6:8–11, 1988).

S. Sudhakar - One of the best experts on this subject based on the ideXlab platform.

Gideon Grafi - One of the best experts on this subject based on the ideXlab platform.

  • Seasonal Growth of Zygophyllum dumosum Boiss.: Summer Dormancy Is Associated with Loss of the Permissive Epigenetic Marker Dimethyl H3K4 and Extensive Reduction in Proteins Involved in Basic Cell Functions
    Plants (Basel Switzerland), 2018
    Co-Authors: Janardan Khadka, Narendra Singh Yadav, Gila Granot, Gideon Grafi
    Abstract:

    Plants thriving in desert environments are suitable for studying mechanisms for plant survival under extreme Seasonal climate variation. We studied epigenetic mechanisms underlying Seasonal Growth cycles in the desert plant Zygophyllum dumosum Boiss., which was previously shown to be deficient in repressive markers of di-methyl and tri-methyl H3K9 and their association with factors regulating basic cell functions. We showed a contingent association between rainfall and Seasonal Growth and the epigenetic marker of dimethyl H3K4, which disappears upon entry into the dry season and the acquisition of a dormant state. DNA methylation is not affected by a lack of H3K9 di-methyl and tri-methyl. Changes in methylation can occur between the wet and dry season. Proteome analysis of acid soluble fractions revealed an extensive reduction in ribosomal proteins and in proteins involved in chloroplasts and mitochondrial activities during the dry seasons concomitantly with up-regulation of molecular chaperone HSPs. Our results highlight mechanisms underlying Z. dumosum adaptation to Seasonal climate variation. Particularly, summer dormancy is associated with a loss of the permissive epigenetic marker dimethyl H3K4, which might facilitate genome compaction concomitantly with a significant reduction in proteins involved in basic cell functions. HSP chaperones might safeguard the integrity of cell components.

  • Seasonal Growth of Zygophyllum dumosum Boiss.: Summer Dormancy is Associated with Loss of the Permissive Epigenetic Marker Dimethyl H3K4 and Extensive Reduction in Proteins Involved in Basic Cell Functions
    2018
    Co-Authors: Janardan Khadka, Narendra Singh Yadav, Gila Granot, Gideon Grafi
    Abstract:

    Plants thriving in desert environments are suitable for studying mechanisms for plant survival under extreme Seasonal climate variation. Zygophyllum dumosum Boiss, like many other Zygophyllaceae species, displays a unique epigenetic mechanism whereby the repressive markers di- and tri-methyl of H3K9 do not exist. We studied epigenetic mechanisms underlying Seasonal Growth cycles in Z. dumosum and their association with factors regulating basic cell functions. We showed strong association between rainfall and Seasonal Growth and the epigenetic marker of dimethyl H3K4, which disappears on entry into the dry season and the acquisition of dormant state. DNA methylation is not affected by lack of H3K9 di and tri methyl and changes in methylation pattern are apparent on entry into the dry season. Proteome analysis of acid soluble fractions revealed extensive reduction in ribosomal proteins and in proteins involved in chloroplasts and mitochondria activities during the dry seasons concomitantly with up-regulation of molecular chaperone HSPs. Our results highlight mechanisms underlying Z. dumosum adaptation to Seasonal climate variation. Particularly, summer dormancy is associated with loss of the permissive epigenetic marker dimethyl H3K4, which might facilitate genome compaction, concomitantly with significant reduction in proteins involved in basic cell functions (i.e., protein synthesis, photosynthesis and respiration).