The Experts below are selected from a list of 1659 Experts worldwide ranked by ideXlab platform
Susan Lucas - One of the best experts on this subject based on the ideXlab platform.
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Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGA T )
Standards in genomic sciences, 2013Co-Authors: Konstantinos Mavromatis, Susan Lucas, Matt Nolan, Jan Fang Cheng, Erko Stackebrandt, Brittany Held, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Roxanne TapiaAbstract:Anaerobaculum mobile Menes and Muxi 2002 is one of three described species of the genus Anaerobaculum, family Synergistaceae, phylum Synergistetes. This anaerobic and motile bacterium ferments a range of carbohydrates and mono- and dicarboxylic acids with acetate, hydrogen and CO2 as end products. A. mobile NGAT is the first member of the genus Anaerobaculum and the sixth member of the phylum Synergistetes with a completely sequenced genome. Here we describe the features of this bacterium, together with the complete genome sequence, and annotation. The 2,160,700 bp long single replicon genome with its 2,053 protein-coding and 56 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
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Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGA^T)
Standards in Genomic Sciences, 2013Co-Authors: Konstantinos Mavromatis, Susan Lucas, Matt Nolan, Jan Fang Cheng, Erko Stackebrandt, Brittany Held, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Roxanne TapiaAbstract:Anaerobaculum mobile Menes and Muxí 2002 is one of three described species of the genus Anaerobaculum , family Synergistaceae , phylum Synergistetes . This anaerobic and motile bacterium ferments a range of carbohydrates and mono- and dicarboxylic acids with acetate, hydrogen and CO_2 as end products. A. mobile NGA^T is the first member of the genus Anaerobaculum and the sixth member of the phylum Synergistetes with a completely sequenced genome. Here we describe the features of this bacterium, together with the complete genome sequence, and annotation. The 2,160,700 bp long single replicon genome with its 2,053 protein-coding and 56 RNA genes is part of the G enomic E ncyclopedia of B acteria and A rchaea project.
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Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314T)
Standards in genomic sciences, 2012Co-Authors: Markus Göker, Susan Lucas, Matt Nolan, Jan Fang Cheng, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Elisabeth Saunders, Cliff Han, Roxanne TapiaAbstract:Thermovirga lienii Dahle and Birkeland 2006 is a member of the genus Thermovirga in the genomically moderately well characterized phylum ‘Synergistetes’. Members of this relatively recently proposed phylum ‘Synergistetes’ are of interest because of their isolated phylogenetic position and their diverse habitats, e.g. from humans to oil wells. The genome of T. lienii Cas60314T is the fifth genome sequence (third completed) from this phylum to be published. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 1,999,646 bp long genome (including one plasmid) with its 1,914 protein-coding and 59 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
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Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207(T))
Standards in genomic sciences, 2010Co-Authors: Kurt Labutti, Shanmugam Mayilraj, Alicia Clum, Susan Lucas, Tijana Glavina Del Rio, Matt Nolan, Hope Tice, Jan Fang Cheng, Sam Pitluck, Konstantinos LioliosAbstract:Dethiosulfovibrio peptidovorans Magot et al. 1997 is the type species of the genus Dethiosulfovibrio of the family Synergistaceae in the recently created phylum Synergistetes. The strictly anaerobic, vibriod, thiosulfate-reducing bacterium utilizes peptides and amino acids, but neither sugars nor fatty acids. It was isolated from an offshore oil well where it was been reported to be involved in pitting corrosion of mild steel. Initially, this bacterium was described as a distant relative of the genus Thermoanaerobacter, but was not assigned to a genus, it was subsequently placed into the novel phylum Synergistetes. A large number of repeats in the genome sequence prevented an economically justifiable closure of the last gaps. This is only the third published genome from a member of the phylum Synergistetes. The 2,576,359 bp long genome consists of three contigs with 2,458 protein-coding and 59 RNA genes and is part of the Genomic Encyclopedia of Bacteria and Archaea project.
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Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883 T )
Standards in genomic sciences, 2009Co-Authors: Mansi Chovatia, Tijana Glavina Del Rio, Matt Nolan, Hope Tice, Jan Fang Cheng, Alla Lapidus, Johannes Sikorski, Maren Schröder, Alex Copeland, Susan LucasAbstract:Thermanaerovibrio acidaminovorans (Guangsheng et al. 1997) Baena et al. 1999 is the type species of the genus Thermanaerovibrio and is of phylogenetic interest because of the very isolated location of the novel phylum Synergistetes. T. acidaminovorans Su883T is a Gram-negative, motile, non-spore-forming bacterium isolated from an anaerobic reactor of a sugar refinery in The Netherlands. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from a member of the phylum Synergistetes. The 1,848,474 bp long single replicon genome with its 1765 protein-coding and 60 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
Roxanne Tapia - One of the best experts on this subject based on the ideXlab platform.
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Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701^T) and emended description of the genus Thermanaerovibrio
Standards in Genomic Sciences, 2013Co-Authors: Krishna Palaniappan, Matt Nolan, Hope Tice, Jan Fang Cheng, Alla Lapidus, Cliff Han, Tijana Glavina Del Rio, Jan P. Meier-kolthoff, Hazuki Teshima, Roxanne TapiaAbstract:Thermanaerovibrio velox Zavarzina et al. 2000 is a member of the Synergistaceae , a family in the phylum Synergistetes that is already well-characterized at the genome level. Members of this phylum were described as Gram-negative staining anaerobic bacteria with a rod/vibrioid cell shape and possessing an atypical outer cell envelope. They inhabit a large variety of anaerobic environments including soil, oil wells, wastewater treatment plants and animal gastrointestinal tracts. They are also found to be linked to sites of human diseases such as cysts, abscesses, and areas of periodontal disease. The moderately thermophilic and organotrophic T. velox shares most of its morphologic and physiologic features with the closely related species, T. acidaminovorans . In addition to Su883^T, the type strain of T. acidaminovorans , stain Z-9701^T is the second type strain in the genus Thermanaerovibrio to have its genome sequence published. Here we describe the features of this organism, together with the non-contiguous genome sequence and annotation. The 1,880,838 bp long chromosome (non-contiguous finished sequence) with its 1,751 protein-coding and 59 RNA genes is a part of the G enomic E ncyclopedia of B acteria and A rchaea project.
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Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGA T )
Standards in genomic sciences, 2013Co-Authors: Konstantinos Mavromatis, Susan Lucas, Matt Nolan, Jan Fang Cheng, Erko Stackebrandt, Brittany Held, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Roxanne TapiaAbstract:Anaerobaculum mobile Menes and Muxi 2002 is one of three described species of the genus Anaerobaculum, family Synergistaceae, phylum Synergistetes. This anaerobic and motile bacterium ferments a range of carbohydrates and mono- and dicarboxylic acids with acetate, hydrogen and CO2 as end products. A. mobile NGAT is the first member of the genus Anaerobaculum and the sixth member of the phylum Synergistetes with a completely sequenced genome. Here we describe the features of this bacterium, together with the complete genome sequence, and annotation. The 2,160,700 bp long single replicon genome with its 2,053 protein-coding and 56 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
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Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGA^T)
Standards in Genomic Sciences, 2013Co-Authors: Konstantinos Mavromatis, Susan Lucas, Matt Nolan, Jan Fang Cheng, Erko Stackebrandt, Brittany Held, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Roxanne TapiaAbstract:Anaerobaculum mobile Menes and Muxí 2002 is one of three described species of the genus Anaerobaculum , family Synergistaceae , phylum Synergistetes . This anaerobic and motile bacterium ferments a range of carbohydrates and mono- and dicarboxylic acids with acetate, hydrogen and CO_2 as end products. A. mobile NGA^T is the first member of the genus Anaerobaculum and the sixth member of the phylum Synergistetes with a completely sequenced genome. Here we describe the features of this bacterium, together with the complete genome sequence, and annotation. The 2,160,700 bp long single replicon genome with its 2,053 protein-coding and 56 RNA genes is part of the G enomic E ncyclopedia of B acteria and A rchaea project.
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Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314T)
Standards in genomic sciences, 2012Co-Authors: Markus Göker, Susan Lucas, Matt Nolan, Jan Fang Cheng, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Elisabeth Saunders, Cliff Han, Roxanne TapiaAbstract:Thermovirga lienii Dahle and Birkeland 2006 is a member of the genus Thermovirga in the genomically moderately well characterized phylum ‘Synergistetes’. Members of this relatively recently proposed phylum ‘Synergistetes’ are of interest because of their isolated phylogenetic position and their diverse habitats, e.g. from humans to oil wells. The genome of T. lienii Cas60314T is the fifth genome sequence (third completed) from this phylum to be published. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 1,999,646 bp long genome (including one plasmid) with its 1,914 protein-coding and 59 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
Matt Nolan - One of the best experts on this subject based on the ideXlab platform.
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Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701^T) and emended description of the genus Thermanaerovibrio
Standards in Genomic Sciences, 2013Co-Authors: Krishna Palaniappan, Matt Nolan, Hope Tice, Jan Fang Cheng, Alla Lapidus, Cliff Han, Tijana Glavina Del Rio, Jan P. Meier-kolthoff, Hazuki Teshima, Roxanne TapiaAbstract:Thermanaerovibrio velox Zavarzina et al. 2000 is a member of the Synergistaceae , a family in the phylum Synergistetes that is already well-characterized at the genome level. Members of this phylum were described as Gram-negative staining anaerobic bacteria with a rod/vibrioid cell shape and possessing an atypical outer cell envelope. They inhabit a large variety of anaerobic environments including soil, oil wells, wastewater treatment plants and animal gastrointestinal tracts. They are also found to be linked to sites of human diseases such as cysts, abscesses, and areas of periodontal disease. The moderately thermophilic and organotrophic T. velox shares most of its morphologic and physiologic features with the closely related species, T. acidaminovorans . In addition to Su883^T, the type strain of T. acidaminovorans , stain Z-9701^T is the second type strain in the genus Thermanaerovibrio to have its genome sequence published. Here we describe the features of this organism, together with the non-contiguous genome sequence and annotation. The 1,880,838 bp long chromosome (non-contiguous finished sequence) with its 1,751 protein-coding and 59 RNA genes is a part of the G enomic E ncyclopedia of B acteria and A rchaea project.
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Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGA T )
Standards in genomic sciences, 2013Co-Authors: Konstantinos Mavromatis, Susan Lucas, Matt Nolan, Jan Fang Cheng, Erko Stackebrandt, Brittany Held, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Roxanne TapiaAbstract:Anaerobaculum mobile Menes and Muxi 2002 is one of three described species of the genus Anaerobaculum, family Synergistaceae, phylum Synergistetes. This anaerobic and motile bacterium ferments a range of carbohydrates and mono- and dicarboxylic acids with acetate, hydrogen and CO2 as end products. A. mobile NGAT is the first member of the genus Anaerobaculum and the sixth member of the phylum Synergistetes with a completely sequenced genome. Here we describe the features of this bacterium, together with the complete genome sequence, and annotation. The 2,160,700 bp long single replicon genome with its 2,053 protein-coding and 56 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
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Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGA^T)
Standards in Genomic Sciences, 2013Co-Authors: Konstantinos Mavromatis, Susan Lucas, Matt Nolan, Jan Fang Cheng, Erko Stackebrandt, Brittany Held, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Roxanne TapiaAbstract:Anaerobaculum mobile Menes and Muxí 2002 is one of three described species of the genus Anaerobaculum , family Synergistaceae , phylum Synergistetes . This anaerobic and motile bacterium ferments a range of carbohydrates and mono- and dicarboxylic acids with acetate, hydrogen and CO_2 as end products. A. mobile NGA^T is the first member of the genus Anaerobaculum and the sixth member of the phylum Synergistetes with a completely sequenced genome. Here we describe the features of this bacterium, together with the complete genome sequence, and annotation. The 2,160,700 bp long single replicon genome with its 2,053 protein-coding and 56 RNA genes is part of the G enomic E ncyclopedia of B acteria and A rchaea project.
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Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314T)
Standards in genomic sciences, 2012Co-Authors: Markus Göker, Susan Lucas, Matt Nolan, Jan Fang Cheng, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Elisabeth Saunders, Cliff Han, Roxanne TapiaAbstract:Thermovirga lienii Dahle and Birkeland 2006 is a member of the genus Thermovirga in the genomically moderately well characterized phylum ‘Synergistetes’. Members of this relatively recently proposed phylum ‘Synergistetes’ are of interest because of their isolated phylogenetic position and their diverse habitats, e.g. from humans to oil wells. The genome of T. lienii Cas60314T is the fifth genome sequence (third completed) from this phylum to be published. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 1,999,646 bp long genome (including one plasmid) with its 1,914 protein-coding and 59 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
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Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207(T))
Standards in genomic sciences, 2010Co-Authors: Kurt Labutti, Shanmugam Mayilraj, Alicia Clum, Susan Lucas, Tijana Glavina Del Rio, Matt Nolan, Hope Tice, Jan Fang Cheng, Sam Pitluck, Konstantinos LioliosAbstract:Dethiosulfovibrio peptidovorans Magot et al. 1997 is the type species of the genus Dethiosulfovibrio of the family Synergistaceae in the recently created phylum Synergistetes. The strictly anaerobic, vibriod, thiosulfate-reducing bacterium utilizes peptides and amino acids, but neither sugars nor fatty acids. It was isolated from an offshore oil well where it was been reported to be involved in pitting corrosion of mild steel. Initially, this bacterium was described as a distant relative of the genus Thermoanaerobacter, but was not assigned to a genus, it was subsequently placed into the novel phylum Synergistetes. A large number of repeats in the genome sequence prevented an economically justifiable closure of the last gaps. This is only the third published genome from a member of the phylum Synergistetes. The 2,576,359 bp long genome consists of three contigs with 2,458 protein-coding and 59 RNA genes and is part of the Genomic Encyclopedia of Bacteria and Archaea project.
Jan Fang Cheng - One of the best experts on this subject based on the ideXlab platform.
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Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701^T) and emended description of the genus Thermanaerovibrio
Standards in Genomic Sciences, 2013Co-Authors: Krishna Palaniappan, Matt Nolan, Hope Tice, Jan Fang Cheng, Alla Lapidus, Cliff Han, Tijana Glavina Del Rio, Jan P. Meier-kolthoff, Hazuki Teshima, Roxanne TapiaAbstract:Thermanaerovibrio velox Zavarzina et al. 2000 is a member of the Synergistaceae , a family in the phylum Synergistetes that is already well-characterized at the genome level. Members of this phylum were described as Gram-negative staining anaerobic bacteria with a rod/vibrioid cell shape and possessing an atypical outer cell envelope. They inhabit a large variety of anaerobic environments including soil, oil wells, wastewater treatment plants and animal gastrointestinal tracts. They are also found to be linked to sites of human diseases such as cysts, abscesses, and areas of periodontal disease. The moderately thermophilic and organotrophic T. velox shares most of its morphologic and physiologic features with the closely related species, T. acidaminovorans . In addition to Su883^T, the type strain of T. acidaminovorans , stain Z-9701^T is the second type strain in the genus Thermanaerovibrio to have its genome sequence published. Here we describe the features of this organism, together with the non-contiguous genome sequence and annotation. The 1,880,838 bp long chromosome (non-contiguous finished sequence) with its 1,751 protein-coding and 59 RNA genes is a part of the G enomic E ncyclopedia of B acteria and A rchaea project.
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Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGA T )
Standards in genomic sciences, 2013Co-Authors: Konstantinos Mavromatis, Susan Lucas, Matt Nolan, Jan Fang Cheng, Erko Stackebrandt, Brittany Held, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Roxanne TapiaAbstract:Anaerobaculum mobile Menes and Muxi 2002 is one of three described species of the genus Anaerobaculum, family Synergistaceae, phylum Synergistetes. This anaerobic and motile bacterium ferments a range of carbohydrates and mono- and dicarboxylic acids with acetate, hydrogen and CO2 as end products. A. mobile NGAT is the first member of the genus Anaerobaculum and the sixth member of the phylum Synergistetes with a completely sequenced genome. Here we describe the features of this bacterium, together with the complete genome sequence, and annotation. The 2,160,700 bp long single replicon genome with its 2,053 protein-coding and 56 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
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Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGA^T)
Standards in Genomic Sciences, 2013Co-Authors: Konstantinos Mavromatis, Susan Lucas, Matt Nolan, Jan Fang Cheng, Erko Stackebrandt, Brittany Held, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Roxanne TapiaAbstract:Anaerobaculum mobile Menes and Muxí 2002 is one of three described species of the genus Anaerobaculum , family Synergistaceae , phylum Synergistetes . This anaerobic and motile bacterium ferments a range of carbohydrates and mono- and dicarboxylic acids with acetate, hydrogen and CO_2 as end products. A. mobile NGA^T is the first member of the genus Anaerobaculum and the sixth member of the phylum Synergistetes with a completely sequenced genome. Here we describe the features of this bacterium, together with the complete genome sequence, and annotation. The 2,160,700 bp long single replicon genome with its 2,053 protein-coding and 56 RNA genes is part of the G enomic E ncyclopedia of B acteria and A rchaea project.
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Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314T)
Standards in genomic sciences, 2012Co-Authors: Markus Göker, Susan Lucas, Matt Nolan, Jan Fang Cheng, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Elisabeth Saunders, Cliff Han, Roxanne TapiaAbstract:Thermovirga lienii Dahle and Birkeland 2006 is a member of the genus Thermovirga in the genomically moderately well characterized phylum ‘Synergistetes’. Members of this relatively recently proposed phylum ‘Synergistetes’ are of interest because of their isolated phylogenetic position and their diverse habitats, e.g. from humans to oil wells. The genome of T. lienii Cas60314T is the fifth genome sequence (third completed) from this phylum to be published. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 1,999,646 bp long genome (including one plasmid) with its 1,914 protein-coding and 59 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
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Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207(T))
Standards in genomic sciences, 2010Co-Authors: Kurt Labutti, Shanmugam Mayilraj, Alicia Clum, Susan Lucas, Tijana Glavina Del Rio, Matt Nolan, Hope Tice, Jan Fang Cheng, Sam Pitluck, Konstantinos LioliosAbstract:Dethiosulfovibrio peptidovorans Magot et al. 1997 is the type species of the genus Dethiosulfovibrio of the family Synergistaceae in the recently created phylum Synergistetes. The strictly anaerobic, vibriod, thiosulfate-reducing bacterium utilizes peptides and amino acids, but neither sugars nor fatty acids. It was isolated from an offshore oil well where it was been reported to be involved in pitting corrosion of mild steel. Initially, this bacterium was described as a distant relative of the genus Thermoanaerobacter, but was not assigned to a genus, it was subsequently placed into the novel phylum Synergistetes. A large number of repeats in the genome sequence prevented an economically justifiable closure of the last gaps. This is only the third published genome from a member of the phylum Synergistetes. The 2,576,359 bp long genome consists of three contigs with 2,458 protein-coding and 59 RNA genes and is part of the Genomic Encyclopedia of Bacteria and Archaea project.
Alla Lapidus - One of the best experts on this subject based on the ideXlab platform.
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Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701^T) and emended description of the genus Thermanaerovibrio
Standards in Genomic Sciences, 2013Co-Authors: Krishna Palaniappan, Matt Nolan, Hope Tice, Jan Fang Cheng, Alla Lapidus, Cliff Han, Tijana Glavina Del Rio, Jan P. Meier-kolthoff, Hazuki Teshima, Roxanne TapiaAbstract:Thermanaerovibrio velox Zavarzina et al. 2000 is a member of the Synergistaceae , a family in the phylum Synergistetes that is already well-characterized at the genome level. Members of this phylum were described as Gram-negative staining anaerobic bacteria with a rod/vibrioid cell shape and possessing an atypical outer cell envelope. They inhabit a large variety of anaerobic environments including soil, oil wells, wastewater treatment plants and animal gastrointestinal tracts. They are also found to be linked to sites of human diseases such as cysts, abscesses, and areas of periodontal disease. The moderately thermophilic and organotrophic T. velox shares most of its morphologic and physiologic features with the closely related species, T. acidaminovorans . In addition to Su883^T, the type strain of T. acidaminovorans , stain Z-9701^T is the second type strain in the genus Thermanaerovibrio to have its genome sequence published. Here we describe the features of this organism, together with the non-contiguous genome sequence and annotation. The 1,880,838 bp long chromosome (non-contiguous finished sequence) with its 1,751 protein-coding and 59 RNA genes is a part of the G enomic E ncyclopedia of B acteria and A rchaea project.
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Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGA T )
Standards in genomic sciences, 2013Co-Authors: Konstantinos Mavromatis, Susan Lucas, Matt Nolan, Jan Fang Cheng, Erko Stackebrandt, Brittany Held, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Roxanne TapiaAbstract:Anaerobaculum mobile Menes and Muxi 2002 is one of three described species of the genus Anaerobaculum, family Synergistaceae, phylum Synergistetes. This anaerobic and motile bacterium ferments a range of carbohydrates and mono- and dicarboxylic acids with acetate, hydrogen and CO2 as end products. A. mobile NGAT is the first member of the genus Anaerobaculum and the sixth member of the phylum Synergistetes with a completely sequenced genome. Here we describe the features of this bacterium, together with the complete genome sequence, and annotation. The 2,160,700 bp long single replicon genome with its 2,053 protein-coding and 56 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
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Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGA^T)
Standards in Genomic Sciences, 2013Co-Authors: Konstantinos Mavromatis, Susan Lucas, Matt Nolan, Jan Fang Cheng, Erko Stackebrandt, Brittany Held, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Roxanne TapiaAbstract:Anaerobaculum mobile Menes and Muxí 2002 is one of three described species of the genus Anaerobaculum , family Synergistaceae , phylum Synergistetes . This anaerobic and motile bacterium ferments a range of carbohydrates and mono- and dicarboxylic acids with acetate, hydrogen and CO_2 as end products. A. mobile NGA^T is the first member of the genus Anaerobaculum and the sixth member of the phylum Synergistetes with a completely sequenced genome. Here we describe the features of this bacterium, together with the complete genome sequence, and annotation. The 2,160,700 bp long single replicon genome with its 2,053 protein-coding and 56 RNA genes is part of the G enomic E ncyclopedia of B acteria and A rchaea project.
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Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314T)
Standards in genomic sciences, 2012Co-Authors: Markus Göker, Susan Lucas, Matt Nolan, Jan Fang Cheng, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Elisabeth Saunders, Cliff Han, Roxanne TapiaAbstract:Thermovirga lienii Dahle and Birkeland 2006 is a member of the genus Thermovirga in the genomically moderately well characterized phylum ‘Synergistetes’. Members of this relatively recently proposed phylum ‘Synergistetes’ are of interest because of their isolated phylogenetic position and their diverse habitats, e.g. from humans to oil wells. The genome of T. lienii Cas60314T is the fifth genome sequence (third completed) from this phylum to be published. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 1,999,646 bp long genome (including one plasmid) with its 1,914 protein-coding and 59 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
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Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883 T )
Standards in genomic sciences, 2009Co-Authors: Mansi Chovatia, Tijana Glavina Del Rio, Matt Nolan, Hope Tice, Jan Fang Cheng, Alla Lapidus, Johannes Sikorski, Maren Schröder, Alex Copeland, Susan LucasAbstract:Thermanaerovibrio acidaminovorans (Guangsheng et al. 1997) Baena et al. 1999 is the type species of the genus Thermanaerovibrio and is of phylogenetic interest because of the very isolated location of the novel phylum Synergistetes. T. acidaminovorans Su883T is a Gram-negative, motile, non-spore-forming bacterium isolated from an anaerobic reactor of a sugar refinery in The Netherlands. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from a member of the phylum Synergistetes. The 1,848,474 bp long single replicon genome with its 1765 protein-coding and 60 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
