Unusual Behavior

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D Thirumalai - One of the best experts on this subject based on the ideXlab platform.

  • on the origin of the Unusual Behavior in the stretching of single stranded dna
    Journal of Chemical Physics, 2012
    Co-Authors: Ngo Minh Toan, D Thirumalai
    Abstract:

    Force-extension curves (FECs), which quantify the response of a variety of biomolecules subject to mechanical force (f), are often quantitatively fit using worm-like chain (WLC) or freely jointed chain (FJC) models. These models predict that the chain extension, x, normalized by the contour length increases linearly at small f and at high forces scale as x ∼ (1 − f−α), where α = 0.5 for WLC and unity for FJC. In contrast, experiments on single-stranded DNA (ssDNA) show that over a range of f and ionic concentration, x scales as x ∼ ln f, which cannot be explained using WLC or FJC models. Using theory and simulations we show that this Unusual Behavior in FEC in ssDNA is due to sequence-independent polyelectrolyte effects. We show that the x ∼ ln f arises because in the absence of force the tangent correlation function, quantifying chain persistence, decays algebraically on length scales on the order of the Debye length. Our theory, which is most appropriate for monovalent salts, quantitatively fits the experimental data and further predicts that such a regime is not discernible in double-stranded DNA.

  • on the origin of the Unusual Behavior in the stretching of single stranded dna
    arXiv: Soft Condensed Matter, 2012
    Co-Authors: Ngo Minh Toan, D Thirumalai
    Abstract:

    Force extension curves (FECs), which quantify the response of a variety of biomolecules subject to mechanical force ($f$), are often quantitatively fit using worm-like chain (WLC) or freely-jointed chain (FJC) models. These models predict that the chain extension, $x$, normalized by the contour length increases linearly at small $f$ and at high forces scale as $x \sim (1 - f^{-\alpha})$ where $\alpha$= 0.5 for WLC and unity for FJC. In contrast, experiments on ssDNA show that over a range of $f$ and ionic concentration, $x$ scales as $x\sim\ln f$, which cannot be explained using WLC or FJC models. Using theory and simulations we show that this Unusual Behavior in FEC in ssDNA is due to sequence-independent polyelectrolyte effects. We show that the $x\sim \ln f$ arises because in the absence of force the tangent correlation function, quantifying chain persistence, decays algebraically on length scales on the order of the Debye length. Our theory, which is most appropriate for monovalent salts, quantitatively fits the experimental data and further predicts that such a regime is not discernible in double stranded DNA.

Ngo Minh Toan - One of the best experts on this subject based on the ideXlab platform.

  • on the origin of the Unusual Behavior in the stretching of single stranded dna
    Journal of Chemical Physics, 2012
    Co-Authors: Ngo Minh Toan, D Thirumalai
    Abstract:

    Force-extension curves (FECs), which quantify the response of a variety of biomolecules subject to mechanical force (f), are often quantitatively fit using worm-like chain (WLC) or freely jointed chain (FJC) models. These models predict that the chain extension, x, normalized by the contour length increases linearly at small f and at high forces scale as x ∼ (1 − f−α), where α = 0.5 for WLC and unity for FJC. In contrast, experiments on single-stranded DNA (ssDNA) show that over a range of f and ionic concentration, x scales as x ∼ ln f, which cannot be explained using WLC or FJC models. Using theory and simulations we show that this Unusual Behavior in FEC in ssDNA is due to sequence-independent polyelectrolyte effects. We show that the x ∼ ln f arises because in the absence of force the tangent correlation function, quantifying chain persistence, decays algebraically on length scales on the order of the Debye length. Our theory, which is most appropriate for monovalent salts, quantitatively fits the experimental data and further predicts that such a regime is not discernible in double-stranded DNA.

  • on the origin of the Unusual Behavior in the stretching of single stranded dna
    arXiv: Soft Condensed Matter, 2012
    Co-Authors: Ngo Minh Toan, D Thirumalai
    Abstract:

    Force extension curves (FECs), which quantify the response of a variety of biomolecules subject to mechanical force ($f$), are often quantitatively fit using worm-like chain (WLC) or freely-jointed chain (FJC) models. These models predict that the chain extension, $x$, normalized by the contour length increases linearly at small $f$ and at high forces scale as $x \sim (1 - f^{-\alpha})$ where $\alpha$= 0.5 for WLC and unity for FJC. In contrast, experiments on ssDNA show that over a range of $f$ and ionic concentration, $x$ scales as $x\sim\ln f$, which cannot be explained using WLC or FJC models. Using theory and simulations we show that this Unusual Behavior in FEC in ssDNA is due to sequence-independent polyelectrolyte effects. We show that the $x\sim \ln f$ arises because in the absence of force the tangent correlation function, quantifying chain persistence, decays algebraically on length scales on the order of the Debye length. Our theory, which is most appropriate for monovalent salts, quantitatively fits the experimental data and further predicts that such a regime is not discernible in double stranded DNA.

O Chauvet - One of the best experts on this subject based on the ideXlab platform.

  • transport properties of pmma carbon nanotubes composites
    Synthetic Metals, 2001
    Co-Authors: Jm Benoit, Benoit Corraze, S Lefrant, Werner J Blau, P Bernier, O Chauvet
    Abstract:

    We report transport measurements on PMMA-singlewalled carbon nanotubes composites films. The films are characterized by Raman spectroscopy, optical absorption and electron microscopy. At room temperature, classical percolation theory applies. It shows that the composites resistivity is indeed controlled by the nanotubes. Decreasing the temperature shows a Unusual Behavior which suggests that a distribution of intertube/interbundle barriers of some 10 of Kelvin is superposed to the topological percolation problem.

Qazi Naveed Ahmed - One of the best experts on this subject based on the ideXlab platform.

Frédéric Kaplan - One of the best experts on this subject based on the ideXlab platform.

  • Robotic clicker training
    Robotics and Autonomous Systems, 2002
    Co-Authors: Frédéric Kaplan, Pierre Yves Oudeyer, Eniko Kubinyi, Adam Miklosi
    Abstract:

    Abstract In this paper, we want to propose the idea that some techniques used for animal training might be helpful for solving human–robot interaction problems in the context of entertainment robotics. We present a model for teaching complex actions to an animal-like autonomous robot based on “clicker training”, a method used efficiently by professional trainers for animals of different species. After describing our implementation of clicker training on an enhanced version of AIBO, Sony’s four-legged robot, we argue that this new method can be a promising technique for teaching Unusual Behavior and sequences of actions to a pet robot.

  • Robotic clicker training (draft)
    2002
    Co-Authors: Frédéric Kaplan, Pierre Yves Oudeyer
    Abstract:

    In this paper we want to propose the idea that some techniques used for animal training might be helpful for solving human robot interaction problems in the context of entertainment robotics. We present a model for teaching complex actions to an animal-like autonomous robot based on ”clicker training”, a method used efficiently by professional trainers for animals of different species. After describing our implementation of clicker training on an enhanced version of AIBO, Sony’s four-legged robot, we argue that this new method can be a promising technique for teaching Unusual Behavior and sequences of actions to a pet robot.

  • Taming robots with clicker training A solution for teaching complex Behaviors
    2001
    Co-Authors: Frédéric Kaplan
    Abstract:

    In this paper we want to propose the idea that some techniques used for animal training might be helpful for solving human robot interaction problems in the context of entertainment robotics. We present a model for teaching complex actions to an animallike autonomous robot based on ”clicker training”, a method used efficiently by professional trainers for animals of different species. After describing our implementation of clicker training on an enhanced version of AIBO, Sony’s four-legged robot, we argue that this new method can be a promising technique for teaching Unusual Behavior and sequences of actions