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David S.m. Billett - One of the best experts on this subject based on the ideXlab platform.
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Deep-sea echinoderm oxygen consumption rates and an interclass comparison of metabolic rates in Asteroidea, Crinoidea, Echinoidea, Holothuroidea and Ophiuroidea.
The Journal of experimental biology, 2011Co-Authors: S.j.m. Hughes, Chris Hauton, Henry A. Ruhl, Lawrence E. Hawkins, Ben Boorman, David S.m. BillettAbstract:Echinoderms are important components of deep-sea communities because of their abundance and the fact that their activities contribute to carbon cycling. Estimating the echinoderm contribution to food webs and carbon cycling is important to our understanding of the functioning of the deep-sea environment and how this may alter in the future as climatic changes take place. Metabolic rate data from deep-sea echinoderm species are, however, scarce. To obtain such data from abyssal echinoderms, a novel in situ respirometer system, the benthic incubation chamber system (BICS), was deployed by remotely operated vehicle (ROV) at depths ranging from 2200 to 3600 m. Oxygen consumption rates were obtained in situ from four species of abyssal echinoderm (Ophiuroidea and Holothuroidea). The design and operation of two versions of BICS are presented here, together with the in situ respirometry measurements. These results were then incorporated into a larger echinoderm metabolic rate data set, which included the metabolic rates of 84 echinoderm species from all five classes (Asteroidea, Crinoidea, Echinoidea, Holothuroidea and Ophiuroidea). The allometric scaling relationships between metabolic rate and body mass derived in this study for each echinoderm class were found to vary. Analysis of the data set indicated no change in echinoderm metabolic rate with depth (by class or phylum). The allometric scaling relationships presented here provide updated information for mass-dependent deep-sea echinoderm metabolic rate for use in ecosystem models, which will contribute to the study of both shallow water and deep-sea ecosystem functioning and biogeochemistry.
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Deep-sea echinoderm oxygen consumption rates and an interclass comparison of metabolic rates in Asteroidea, Crinoidea, Echinoidea, Holothuroidea and Ophiuroidea.
Journal of Experimental Biology, 2011Co-Authors: S.j.m. Hughes, Chris Hauton, Henry A. Ruhl, Lawrence E. Hawkins, Ben Boorman, David S.m. BillettAbstract:Echinoderms are important components of deep-sea communities because their abundance and their activities contribute to carbon cycling. Estimating echinoderm contribution to food webs and carbon cycling is important to our understanding of the functioning of the deep-sea environment and how this may alter in the future as climatic changes take place. Metabolic rate data from deep-sea echinoderm species are however scarce. To obtain such data from abyssal echinoderms a novel in situ respirometer system, the Benthic Incubation Chamber System (BICS), was deployed by ROV at depths ranging from 2200 to 3600 m. Oxygen consumption rates were obtained in situ from four species of abyssal echinoderm (Ophiuroidea and Holothuroidea). The design and operation of two versions of BICS are presented here, together with the in situ respirometry measurements. These results were then incorporated into a larger echinoderm metabolic rate data set, which incorporated the metabolic rates of 84 echinoderm species from all five classes (Asteroidea, Crinoidea, Echinoidea, Holothuroidea and Ophiuroidea). The allometric scaling relationships between metabolic rate and body mass derived in this study for each echinoderm class were found to vary. Analysis of the data set indicated no change in echinoderm metabolic rate with depth (by class or phylum). The allometric scaling relationships presented here provide updated information for weight dependant deep-sea echinoderm metabolic rates for use in ecosystem models, which will contribute to the study of both shallow water and deep-sea ecosystem functioning and biogeochemistry.
Sabine Stöhr - One of the best experts on this subject based on the ideXlab platform.
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Comparison of 2D SEM imaging with 3D micro-tomographic imaging for phylogenetic inference in brittle stars (Echinodermata: Ophiuroidea)
Zoosymposia, 2019Co-Authors: Sabine Stöhr, Elizabeth G. Clark, Ben Thuy, Simon A.f. DarrochAbstract:Comparison of 2D SEM imaging with 3D micro-tomographic imaging for phylogenetic inference in brittle stars (Echinodermata: Ophiuroidea)
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A New Fissiparous Brittle Star, Ophiacantha scissionis sp. nov. (Echinodermata, Ophiuroidea, Ophiacanthida), from Jeju Island, Korea.
Zoological studies, 2019Co-Authors: Taekjun Lee, Sabine Stöhr, Yeon Jae Bae, Sook ShinAbstract:A new species of Ophiuroidea, Ophiacantha scissionis sp. nov., is described. It was collected from Munseom Island, Jeju-do, South Korea at a depth of 28-36 m, by SCUBA diving. Ophiacantha scissionis has unique and distinct morphological characteristics: small disk, densely covered by small trifid spines, radial shields completely concealed by disk spines, six arms with four arm spines proximally, fissiparous. In addition, this species is clearly distinguished from other species of Ophiacantha by mitochondrial COI. This species is usually hexamerous and reproduces asexually by fissiparity. It is the first report of fissiparous reproduction in the genus Ophiacantha.
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a new morphological phylogeny of the Ophiuroidea echinodermata accords with molecular evidence and renders microfossils accessible for cladistics
PLOS ONE, 2016Co-Authors: Ben Thuy, Sabine StöhrAbstract:Ophiuroid systematics is currently in a state of upheaval, with recent molecular estimates fundamentally clashing with traditional, morphology-based classifications. Here, we attempt a long overdue recast of a morphological phylogeny estimate of the Ophiuroidea taking into account latest insights on microstructural features of the arm skeleton. Our final estimate is based on a total of 45 ingroup taxa, including 41 recent species covering the full range of extant ophiuroid higher taxon diversity and 4 fossil species known from exceptionally preserved material, and the Lower Carboniferous Aganaster gregarius as the outgroup. A total of 130 characters were scored directly on specimens. The tree resulting from the Bayesian inference analysis of the full data matrix is reasonably well resolved and well supported, and refutes all previous classifications, with most traditional families discredited as poly- or paraphyletic. In contrast, our tree agrees remarkably well with the latest molecular estimate, thus paving the way towards an integrated new classification of the Ophiuroidea. Among the characters which were qualitatively found to accord best with our tree topology, we selected a list of potential synapomorphies for future formal clade definitions. Furthermore, an analysis with 13 of the ingroup taxa reduced to the lateral arm plate characters produced a tree which was essentially similar to the full dataset tree. This suggests that dissociated lateral arm plates can be analysed in combination with fully known taxa and thus effectively unlocks the extensive record of fossil lateral arm plates for phylogenetic estimates. Finally, the age and position within our tree implies that the ophiuroid crown-group had started to diversify by the Early Triassic.
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Inventory of echinoderms in the Iles Eparses (Europa, Glorieuses, Juan de Nova), Mozambique Channel, France
Acta Oecologica, 2016Co-Authors: Chantal Conand, Thierry Mulochau, Sabine Stöhr, Marc Eleaume, Pascale ChabanetAbstract:The multidisciplinary programme BioReCIE (Biodiversity, Resources and Conservation of coral reefs at Eparses Is.) inventoried multiple marine animal groups in order to provide information on the coral reef health of the Iles Eparses. All five classes of echinoderms were observed by visual census, photographed and later identified. About 100 species are reported, including a few unidentified ones which require further studies. The Holothuroidea and Ophiuroidea are the most diverse. One new species, the asterinid Aquilonastra chantalae O'Loughlin and McKenzie (2013), was discovered in addition to several new records of echinoderms. The illegal fishery targeting holothurians, which are presently highly valuable resources in this zone, is discussed.
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Molecular Species Delimitation of Icelandic Brittle Stars (Ophiuroidea)
Polish Polar Research, 2014Co-Authors: Sahar Khodami, Sabine Stöhr, Pedro Martínez Arbizu, Silke LaakmannAbstract:Brittle stars (Echinodermata: Ophiuroidea) comprise over 2,000 species, all of which inhabit marine environments and can be abundant in the deep sea. Morphological plasticity in number and shape of skeletal parts, as well as variable colors, can complicate correct species identification. Consequently, DNA sequence analysis can play an important role in species identification. In this study we compared the genetic variability of the mito− chondrial cytochrome c subunit I gene (COI) and the nuclear small subunit ribosomal DNA (SSU, 18S rDNA) to morphological identification of 66 specimens of 11 species collected from the North Atlantic in Icelandic waters. Also two species delimitation tools, Automatic Barcode Gap Discovery (ABGD) and General Mixed Yule Coalescence Method (GMYC) were performed to test species hypotheses. The analysis of both gene fragments was suc− cessful to discriminate between species and provided new insights into some morphological species hypothesis. Although less divergent than COI, it is helpful to use the SSU region as a complementary fragment to the barcoding gene. Key wor ds: Icelandic waters, ophiuroids, echinoderms, ABGD, COI, GMYC, SSU.
Ben Thuy - One of the best experts on this subject based on the ideXlab platform.
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Comparison of 2D SEM imaging with 3D micro-tomographic imaging for phylogenetic inference in brittle stars (Echinodermata: Ophiuroidea)
Zoosymposia, 2019Co-Authors: Sabine Stöhr, Elizabeth G. Clark, Ben Thuy, Simon A.f. DarrochAbstract:Comparison of 2D SEM imaging with 3D micro-tomographic imaging for phylogenetic inference in brittle stars (Echinodermata: Ophiuroidea)
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a new morphological phylogeny of the Ophiuroidea echinodermata accords with molecular evidence and renders microfossils accessible for cladistics
PLOS ONE, 2016Co-Authors: Ben Thuy, Sabine StöhrAbstract:Ophiuroid systematics is currently in a state of upheaval, with recent molecular estimates fundamentally clashing with traditional, morphology-based classifications. Here, we attempt a long overdue recast of a morphological phylogeny estimate of the Ophiuroidea taking into account latest insights on microstructural features of the arm skeleton. Our final estimate is based on a total of 45 ingroup taxa, including 41 recent species covering the full range of extant ophiuroid higher taxon diversity and 4 fossil species known from exceptionally preserved material, and the Lower Carboniferous Aganaster gregarius as the outgroup. A total of 130 characters were scored directly on specimens. The tree resulting from the Bayesian inference analysis of the full data matrix is reasonably well resolved and well supported, and refutes all previous classifications, with most traditional families discredited as poly- or paraphyletic. In contrast, our tree agrees remarkably well with the latest molecular estimate, thus paving the way towards an integrated new classification of the Ophiuroidea. Among the characters which were qualitatively found to accord best with our tree topology, we selected a list of potential synapomorphies for future formal clade definitions. Furthermore, an analysis with 13 of the ingroup taxa reduced to the lateral arm plate characters produced a tree which was essentially similar to the full dataset tree. This suggests that dissociated lateral arm plates can be analysed in combination with fully known taxa and thus effectively unlocks the extensive record of fossil lateral arm plates for phylogenetic estimates. Finally, the age and position within our tree implies that the ophiuroid crown-group had started to diversify by the Early Triassic.
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Phylogenomic Resolution of the Class Ophiuroidea Unlocks a Global Microfossil Record
Current biology : CB, 2014Co-Authors: Timothy D. O'hara, Ben Thuy, Andrew F. Hugall, Adnan MoussalliAbstract:Summary Our understanding of the origin, evolution, and biogeography of seafloor fauna is limited because we have insufficient spatial and temporal data to resolve underlying processes [1]. The abundance and wide distribution of modern and disarticulated fossil Ophiuroidea [2], including brittle stars and basket stars, make them an ideal model system for global marine biogeography if we have the phylogenetic framework necessary to link extant and fossil morphology in an evolutionary context. Here we construct a phylogeny from a highly complete 425-gene, 61-taxa transcriptome-based data set covering 15 of the 18 ophiuroid families and representatives of all extant echinoderm classes. We calibrate our phylogeny with a series of novel fossil discoveries from the early Mesozoic. We confirm the traditional paleontological view that ophiuroids are sister to the asteroids and date the crown group Ophiuroidea to the mid-Permian (270 ± 30 mega-annum). We refute all historical classification schemes of the Ophiuroidea based on gross structural characters but find strong congruence with schemes based on lateral arm plate microstructure [3, 4] and the temporal appearance of various plate morphologies in the fossil record. The verification that these microfossils contain phylogenetically informative characters unlocks their potential to advance our understanding of marine biogeographical processes.
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global diversity of brittle stars echinodermata Ophiuroidea
PLOS ONE, 2012Co-Authors: Sabine Stöhr, Timothy D Ohara, Ben ThuyAbstract:This review presents a comprehensive overview of the current status regarding the global diversity of the echinoderm class Ophiuroidea, focussing on taxonomy and distribution patterns, with brief introduction to their anatomy, biology, phylogeny, and palaeontological history. A glossary of terms is provided. Species names and taxonomic decisions have been extracted from the literature and compiled in The World Ophiuroidea Database, part of the World Register of Marine Species (WoRMS). Ophiuroidea, with 2064 known species, are the largest class of Echinodermata. A table presents 16 families with numbers of genera and species. The largest are Amphiuridae (467), Ophiuridae (344 species) and Ophiacanthidae (319 species). A biogeographic analysis for all world oceans and all accepted species was performed, based on published distribution records. Approximately similar numbers of species were recorded from the shelf (n = 1313) and bathyal depth strata (1297). The Indo-Pacific region had the highest species richness overall (825 species) and at all depths. Adjacent regions were also relatively species rich, including the North Pacific (398), South Pacific (355) and Indian (316) due to the presence of many Indo-Pacific species that partially extended into these regions. A secondary region of enhanced species richness was found in the West Atlantic (335). Regions of relatively low species richness include the Arctic (73 species), East Atlantic (118), South America (124) and Antarctic (126).
S.j.m. Hughes - One of the best experts on this subject based on the ideXlab platform.
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Deep-sea echinoderm oxygen consumption rates and an interclass comparison of metabolic rates in Asteroidea, Crinoidea, Echinoidea, Holothuroidea and Ophiuroidea.
The Journal of experimental biology, 2011Co-Authors: S.j.m. Hughes, Chris Hauton, Henry A. Ruhl, Lawrence E. Hawkins, Ben Boorman, David S.m. BillettAbstract:Echinoderms are important components of deep-sea communities because of their abundance and the fact that their activities contribute to carbon cycling. Estimating the echinoderm contribution to food webs and carbon cycling is important to our understanding of the functioning of the deep-sea environment and how this may alter in the future as climatic changes take place. Metabolic rate data from deep-sea echinoderm species are, however, scarce. To obtain such data from abyssal echinoderms, a novel in situ respirometer system, the benthic incubation chamber system (BICS), was deployed by remotely operated vehicle (ROV) at depths ranging from 2200 to 3600 m. Oxygen consumption rates were obtained in situ from four species of abyssal echinoderm (Ophiuroidea and Holothuroidea). The design and operation of two versions of BICS are presented here, together with the in situ respirometry measurements. These results were then incorporated into a larger echinoderm metabolic rate data set, which included the metabolic rates of 84 echinoderm species from all five classes (Asteroidea, Crinoidea, Echinoidea, Holothuroidea and Ophiuroidea). The allometric scaling relationships between metabolic rate and body mass derived in this study for each echinoderm class were found to vary. Analysis of the data set indicated no change in echinoderm metabolic rate with depth (by class or phylum). The allometric scaling relationships presented here provide updated information for mass-dependent deep-sea echinoderm metabolic rate for use in ecosystem models, which will contribute to the study of both shallow water and deep-sea ecosystem functioning and biogeochemistry.
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Deep-sea echinoderm oxygen consumption rates and an interclass comparison of metabolic rates in Asteroidea, Crinoidea, Echinoidea, Holothuroidea and Ophiuroidea.
Journal of Experimental Biology, 2011Co-Authors: S.j.m. Hughes, Chris Hauton, Henry A. Ruhl, Lawrence E. Hawkins, Ben Boorman, David S.m. BillettAbstract:Echinoderms are important components of deep-sea communities because their abundance and their activities contribute to carbon cycling. Estimating echinoderm contribution to food webs and carbon cycling is important to our understanding of the functioning of the deep-sea environment and how this may alter in the future as climatic changes take place. Metabolic rate data from deep-sea echinoderm species are however scarce. To obtain such data from abyssal echinoderms a novel in situ respirometer system, the Benthic Incubation Chamber System (BICS), was deployed by ROV at depths ranging from 2200 to 3600 m. Oxygen consumption rates were obtained in situ from four species of abyssal echinoderm (Ophiuroidea and Holothuroidea). The design and operation of two versions of BICS are presented here, together with the in situ respirometry measurements. These results were then incorporated into a larger echinoderm metabolic rate data set, which incorporated the metabolic rates of 84 echinoderm species from all five classes (Asteroidea, Crinoidea, Echinoidea, Holothuroidea and Ophiuroidea). The allometric scaling relationships between metabolic rate and body mass derived in this study for each echinoderm class were found to vary. Analysis of the data set indicated no change in echinoderm metabolic rate with depth (by class or phylum). The allometric scaling relationships presented here provide updated information for weight dependant deep-sea echinoderm metabolic rates for use in ecosystem models, which will contribute to the study of both shallow water and deep-sea ecosystem functioning and biogeochemistry.
Ben Boorman - One of the best experts on this subject based on the ideXlab platform.
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Deep-sea echinoderm oxygen consumption rates and an interclass comparison of metabolic rates in Asteroidea, Crinoidea, Echinoidea, Holothuroidea and Ophiuroidea.
The Journal of experimental biology, 2011Co-Authors: S.j.m. Hughes, Chris Hauton, Henry A. Ruhl, Lawrence E. Hawkins, Ben Boorman, David S.m. BillettAbstract:Echinoderms are important components of deep-sea communities because of their abundance and the fact that their activities contribute to carbon cycling. Estimating the echinoderm contribution to food webs and carbon cycling is important to our understanding of the functioning of the deep-sea environment and how this may alter in the future as climatic changes take place. Metabolic rate data from deep-sea echinoderm species are, however, scarce. To obtain such data from abyssal echinoderms, a novel in situ respirometer system, the benthic incubation chamber system (BICS), was deployed by remotely operated vehicle (ROV) at depths ranging from 2200 to 3600 m. Oxygen consumption rates were obtained in situ from four species of abyssal echinoderm (Ophiuroidea and Holothuroidea). The design and operation of two versions of BICS are presented here, together with the in situ respirometry measurements. These results were then incorporated into a larger echinoderm metabolic rate data set, which included the metabolic rates of 84 echinoderm species from all five classes (Asteroidea, Crinoidea, Echinoidea, Holothuroidea and Ophiuroidea). The allometric scaling relationships between metabolic rate and body mass derived in this study for each echinoderm class were found to vary. Analysis of the data set indicated no change in echinoderm metabolic rate with depth (by class or phylum). The allometric scaling relationships presented here provide updated information for mass-dependent deep-sea echinoderm metabolic rate for use in ecosystem models, which will contribute to the study of both shallow water and deep-sea ecosystem functioning and biogeochemistry.
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Deep-sea echinoderm oxygen consumption rates and an interclass comparison of metabolic rates in Asteroidea, Crinoidea, Echinoidea, Holothuroidea and Ophiuroidea.
Journal of Experimental Biology, 2011Co-Authors: S.j.m. Hughes, Chris Hauton, Henry A. Ruhl, Lawrence E. Hawkins, Ben Boorman, David S.m. BillettAbstract:Echinoderms are important components of deep-sea communities because their abundance and their activities contribute to carbon cycling. Estimating echinoderm contribution to food webs and carbon cycling is important to our understanding of the functioning of the deep-sea environment and how this may alter in the future as climatic changes take place. Metabolic rate data from deep-sea echinoderm species are however scarce. To obtain such data from abyssal echinoderms a novel in situ respirometer system, the Benthic Incubation Chamber System (BICS), was deployed by ROV at depths ranging from 2200 to 3600 m. Oxygen consumption rates were obtained in situ from four species of abyssal echinoderm (Ophiuroidea and Holothuroidea). The design and operation of two versions of BICS are presented here, together with the in situ respirometry measurements. These results were then incorporated into a larger echinoderm metabolic rate data set, which incorporated the metabolic rates of 84 echinoderm species from all five classes (Asteroidea, Crinoidea, Echinoidea, Holothuroidea and Ophiuroidea). The allometric scaling relationships between metabolic rate and body mass derived in this study for each echinoderm class were found to vary. Analysis of the data set indicated no change in echinoderm metabolic rate with depth (by class or phylum). The allometric scaling relationships presented here provide updated information for weight dependant deep-sea echinoderm metabolic rates for use in ecosystem models, which will contribute to the study of both shallow water and deep-sea ecosystem functioning and biogeochemistry.